Evidence map›Paper›PMID 11711437›Full record

ArticleGenes & development2001

TIF1beta functions as a coactivator for C/EBPbeta and is required for induced differentiation in the myelomonocytic cell line U937.

J W Rooney, K L Calame

RetractedOpen access · diamondAbstract readRetracted Publication
In one paragraph

Article in Genes & development, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It has been retracted, and should not be counted. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. KAP1 protein: an enigmatic master regulator of the genome.The Journal of biological chemistry · 2011
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

J W RooneyDepartment of Microbiology, Columbia School for Physicians and Surgeons, New York, New York 10032, USA.
K L Calame
Columbia University · US

Funding

POSTDOCTORAL TRAINING IN ARTERIOSCLEROSIS RESEARCHT32HL007343 · NHLBI · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI HENRY N GINSBERG, Muredach P Reilly · 1985 to 2026
$12.7M
TRANSCRIPTION OF IMMUNOGLUBULIN HEAVY CHAIN GENESR01GM029361 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI CALAME, KATHRYN L. · 1985 to 2001
$831k
NHLBI NIH HHS T32 HL007343NHLBI NIH HHS T32-HL07343NIGMS NIH HHS R01 GM29361PHS HHS R01 A143567
6 · The paper itself

Abstract

Representational difference analysis (RDA) cloning has identified transcriptional intermediary factor 1 beta (TIF1beta) as a gene inducibly expressed early during myeloid differentiation of the promyelocytic cell lines HL-60 and U937. To assess the role of TIF1beta, U937 cell lines were made that expressed antisense-hammerhead ribozymes targeted specifically against TIF1beta mRNA. These cells failed to differentiate into macrophages, as determined by several criteria: a nonadherent morphology, a failure to arrest cell cycle, lowered levels of macrophage-specific cell surface markers, resistance to Legionella pneumophila infection, a loss of the ability to phagocytose and chemotax, and decreased expression of chemokine mRNAs. One way TIF1beta acts in macrophage differentiation is to augment C/EBPbeta transcriptional activity. Furthermore, we show by EMSA supershifts and coimmunoprecipitation that C/EBPbeta and TIF1beta physically interact. Although TIF1beta is necessary for macrophage differentiation of U937 cells, it is not sufficient, based on the inability of ectopically expressed TIF1beta to induce or augment phorbol ester-induced macrophage differentiation. We conclude that TIF1beta plays an important role in the terminal differentiation program of macrophages, which involves the coactivation of C/EBPbeta and induction of C/EBPbeta-responsive myeloid genes.

Indexed as

Binding SitesBlotting, NorthernBlotting, WesternCCAAT-Enhancer-Binding Protein-betaCell CycleCell DifferentiationCell LineCell NucleusCell SeparationChemokine CCL5DNA-Binding ProteinsDose-Response Relationship, DrugFlow CytometryHL-60 CellsHumansLegionella pneumophilaCCAAT-Enhancer-Binding Protein-betaChemokine CCL5DNA-Binding ProteinsRepressor ProteinsRibonucleasesRNA, CatalyticRNA, MessengerTRIM28 protein, humanTripartite Motif-Containing Protein 28

Identifiers

PMID11711437
PMCPMC312827
OpenAlexW2153212259

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.