Evidence map›Paper›PMID 11710839›Full record

ArticleBritish journal of cancer2001

Analysis of the TSC1 and TSC2 genes in sporadic renal cell carcinomas.

L Parry, J H Maynard, A Patel, S C Clifford, C Morrissey, E R Maher, J P Cheadle, J R Sampson

Open access · bronzeAbstract read
In one paragraph

Article in British journal of cancer, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
0.6field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 46 citations in OpenAlex.

  1. Article
  2. Article
  3. Tuberous sclerosis complex: the past and the future.Pediatric nephrology (Berlin, Germany) · 2015
    Review
  4. Tuberous sclerosis complex 2 loss of heterozygosity in patients with lung disease and cancer.American journal of respiratory and critical care medicine · 2015
    Article
  5. Article
  6. Evidence for aldosterone-dependent growth of renal cell carcinoma.International journal of experimental pathology · 2014
    Article
  7. Article
  8. State of the science: an update on renal cell carcinoma.Molecular cancer research : MCR · 2012
    Review
  9. Renal cancer: oxygen meets metabolism.Experimental cell research · 2012
    Review
  10. Non-invasive imaging of PI3K/Akt/mTOR signalling in cancer.American journal of nuclear medicine and molecular imaging · 2012
    Article
  11. Article
  12. Article
  13. Article
  14. Tuberous sclerosis complex: a brave new world?Current opinion in neurology · 2010
    Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

L ParryInstitute of Medical Genetics, University of Wales College of Medicine, Cardiff, CF14 4XN, UK.
J H Maynard
A Patel
S C Clifford
C Morrissey
E R Maher
J P Cheadle
J R Sampson
University of Wales · GBUniversity of Birmingham · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The genetic events involved in the aetiology of non-clear-cell renal cell carcinoma (RCC) and a proportion of clear cell RCC remain to be defined. Germline mutations of the TSC1 and TSC2 genes cause tuberous sclerosis (TSC), a multi-system hamartoma syndrome that is also associated with RCC. We assessed 17 sporadic clear cell RCCs with a previously identified VHL mutation, 15 clear-cell RCCs without an identified VHL mutation and 15 non-clear-cell RCCs for loss of heterozygosity (LOH) at chromosomes 9q34 and 16p13.3, the chromosomal locations of TSC1 and TSC2. LOH was detected in 4/9, 1/11 and 3/13 cases informative at both loci. SSCP analysis of the whole coding region of the retained allele did not reveal any cases with a detectable intragenic second somatic mutation. Furthermore, RT-PCR analysis of TSC1 and TSC2 on total RNA from 8 clear-cell RCC cell lines confirmed expression of both TSC genes. These data indicate that biallelic inactivation of TSC1 or TSC2 is not frequent in sporadic RCC and suggests that the molecular mechanisms of renal carcinogenesis in TSC are likely to be distinct.

Indexed as

AllelesCarcinoma, Renal CellHumansKidney NeoplasmsLoss of HeterozygosityPolymorphism, Single-Stranded ConformationalProteinsRepressor ProteinsReverse Transcriptase Polymerase Chain ReactionTuberous Sclerosis Complex 1 ProteinTuberous Sclerosis Complex 2 ProteinTumor Cells, CulturedTumor Suppressor ProteinsProteinsRepressor ProteinsTSC1 protein, humanTSC2 protein, humanTuberous Sclerosis Complex 1 ProteinTuberous Sclerosis Complex 2 ProteinTumor Suppressor Proteins

Identifiers

PMID11710839
PMCPMC2375153
OpenAlexW75753579

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.