Evidence map›Paper›PMID 11706177›Full record

ArticlePlant physiology2001

Molecular characterization of two Arabidopsis Ire1 homologs, endoplasmic reticulum-located transmembrane protein kinases.

N Koizumi, I M Martinez, Y Kimata, K Kohno, H Sano, M J Chrispeels

Abstract read
In one paragraph

Article in Plant physiology, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 111 papers.

0numbers the graph read from it
0cells of the map it votes in
111citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

111 citing papers in PubMed.

  1. Article
  2. CDS-localized mNature plants · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Review
  12. Organelle Communication with the Nucleus.Results and problems in cell differentiation · 2024
    Review
  13. Article
  14. Mechanisms of Endoplasmic Reticulum Protein Homeostasis in Plants.International journal of molecular sciences · 2023
    Review
  15. Article
  16. Review
  17. Article
  18. Relevance of the Exocyst in ArabidopsisInternational journal of molecular sciences · 2022
    Article
  19. Review
  20. Genome-Wide Prediction and Analysis ofInternational journal of molecular sciences · 2022
    Article

51 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

N KoizumiDivision of Biology, University of California San Diego, La Jolla, CA 92039-0116, USA.
I M Martinez
Y Kimata
K Kohno
H Sano
M J Chrispeels

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A major response of eukaryotic cells to the presence of unfolded proteins in the lumen of the endoplasmic reticulum (ER) is to activate genes that encode ER-located molecular chaperones, such as the binding protein. This response, called the unfolded protein response, requires the transduction of a signal from the ER to the nucleus. In yeast (Saccharomyces cerevisiae) and mammalian cells, an ER-located transmembrane receptor protein kinase/ribonuclease called Ire1, with a sensor domain in the lumen of the ER, is the first component of this pathway. Here, we report the cloning and derived amino acid sequences of AtIre1-1 and AtIre1-2, two Arabidopsis homologs of Ire1. The two proteins are located in the perinuclear ER (based on heterologous expression of fusions with green fluorescent protein). The expression patterns of the two genes (using beta-glucuronidase fusions) are nearly nonoverlapping. We also demonstrate functional complementation of the sensor domains of the two proteins in yeast and show that the Ire1-2 protein is capable of autotransphosphorylation. These and other findings are discussed in relation to the involvement of these genes in unfolded protein response signaling in plants.

Indexed as

Protein Serine-Threonine KinasesSaccharomyces cerevisiae ProteinsAmino Acid SequenceArabidopsisArabidopsis ProteinsCarrier ProteinsCell NucleusCloning, MolecularEndoplasmic ReticulumFungal ProteinsGene Expression Regulation, PlantImmunohistochemistryMembrane GlycoproteinsMembrane ProteinsMolecular ChaperonesMolecular Sequence DataArabidopsis Proteinsautophosphorylation-dependent multifunctional protein kinaseCarrier ProteinsFungal ProteinsIre1-1 protein, ArabidopsisIre1-2 protein, ArabidopsisIRE1 protein, S cerevisiaeMembrane GlycoproteinsMembrane ProteinsMolecular ChaperonesProtein KinasesProtein Serine-Threonine KinasesSaccharomyces cerevisiae ProteinsTunicamycin

Identifiers

PMID11706177
PMCPMC129266

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.