Evidence map›Paper›PMID 11694578›Full record

ArticleMolecular biology of the cell2001

The target of rapamycin signaling pathway regulates mRNA turnover in the yeast Saccharomyces cerevisiae.

A R Albig, C J Decker

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 60 citations in OpenAlex.

  1. Review
  2. International journal of molecular sciences · 2022
    Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Protein Kinases at the Intersection of Translation and Virulence.Frontiers in cellular and infection microbiology · 2019
    Review
  8. Article
  9. Article
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  11. Article
  12. Article
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  16. Article
  17. Article
  18. Review
  19. The 2',3'-cAMP-adenosine pathway.American journal of physiology. Renal physiology · 2011
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

A R AlbigSchool of Molecular Biosciences, Washington State University, Pullman, WA 99164-4234, USA.
C J Decker
Washington State University · US

Funding

CONTROL OF MRNA DECAY BY THE YEAST MFA2 MRNAS 3UTRR29GM055132 · NIGMS · WASHINGTON STATE UNIVERSITY · PI DECKER, CAROLYN J · 1997 to 2001
$213k
NIGMS NIH HHS GM55132
6 · The paper itself

Abstract

The target of rapamycin (TOR) signaling pathway is an important mechanism by which cell growth is regulated by nutrient availability in eukaryotes. We provide evidence that the TOR signaling pathway controls mRNA turnover in Saccharomyces cerevisiae. During nutrient limitation (diauxic shift) or after treatment with rapamycin (a specific inhibitor of TOR), multiple mRNAs were destabilized, whereas the decay of other mRNAs was unaffected. Our findings suggest that the regulation of mRNA decay by the TOR pathway may play a significant role in controlling gene expression in response to nutrient depletion. The inhibition of the TOR pathway accelerated the major mRNA decay mechanism in yeast, the deadenylation-dependent decapping pathway. Of the destabilized mRNAs, two different responses to rapamycin were observed. Some mRNAs were destabilized rapidly, while others were affected only after prolonged exposure. Our data suggest that the mRNAs that respond rapidly are destabilized because they have short poly(A) tails prematurely either as a result of rapid deadenylation or reduced polyadenylation. In contrast, the mRNAs that respond slowly are destabilized by rapid decapping. In summary, the control of mRNA turnover by the TOR pathway is complex in that it specifically regulates the decay of some mRNAs and not others and that it appears to control decay by multiple mechanisms.

Indexed as

Phosphatidylinositol 3-KinasesSaccharomyces cerevisiae ProteinsSignal Transduction3-Phosphoshikimate 1-CarboxyvinyltransferaseAlkyl and Aryl TransferasesAntifungal AgentsDrug Resistance, FungalFungal ProteinsPhosphotransferases (Alcohol Group Acceptor)Poly ARibosomal ProteinsRNA, FungalRNA, MessengerRNA StabilitySaccharomyces cerevisiaeSirolimus3-Phosphoshikimate 1-CarboxyvinyltransferaseAlkyl and Aryl TransferasesAntifungal AgentsFungal ProteinsPhosphatidylinositol 3-KinasesPhosphotransferases (Alcohol Group Acceptor)Poly ARibosomal ProteinsRNA, FungalRNA, MessengerRPS14A protein, S cerevisiaeSaccharomyces cerevisiae ProteinsSirolimusTacrolimus Binding ProteinsTOR1 protein, S cerevisiae

Identifiers

PMID11694578
PMCPMC60265
OpenAlexW2149115160

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.