Evidence map›Paper›PMID 11691847›Full record

ArticleGenome research2001

Random monoallelic expression of three genes clustered within 60 kb of mouse t complex genomic DNA.

Y Sano, T Shimada, H Nakashima, R H Nicholson, J F Eliason, T A Kocarek, M S Ko

Abstract read
In one paragraph

Article in Genome research, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. The cld mutation: narrowing the critical chromosomal region and selecting candidate genes.Mammalian genome : official journal of the International Mammalian Genome Society · 2006
    Article
  9. Monoallelic expression of the protease inhibitor gene in humans, sheep, and cattle.Mammalian genome : official journal of the International Mammalian Genome Society · 2005
    Article
  10. Article
  11. High concentrations of long interspersed nuclear element sequence distinguish monoallelically expressed genes.Proceedings of the National Academy of Sciences of the United States of America · 2003
    Article
  12. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors.

Y SanoDevelopmental Genomics and Aging Section, Laboratory of Genetics, National Institute on Aging, National Institutes of Health, Baltimore, MD 21224, USA.
T Shimada
H Nakashima
R H Nicholson
J F Eliason
T A Kocarek
M S Ko

Funding

Cellular Commitment To Mortality:Mouse Early EmbryoZ01AG000655 · NIA · NATIONAL INSTITUTE ON AGING · PI KO, MINORU S · 1999 to 2008
$944k
Random Monoaelletic expression of genesZ01AG000654 · NIA · AGING · PI KO, MINORU S · 1999 to 2000
–
NICHD NIH HHS R01 HD-32248
6 · The paper itself

Abstract

Mammals achieve gene dosage control by (1) random X-chromosome inactivation in females, (2) parental origin-specific imprinting of selected autosomal genes, and (3) random autosomal inactivation. Genes belonging to the third category of epigenetic phenomenon are just now emerging, with only six identified so far. Here we report three additional genes, Nubp2, Igfals, and Jsap1, that show 50%-methylated CpG sites by Southern blot analyses and primarily monoallelic expression in single-cell allele-specific RT-PCR analysis of bone marrow stromal cells and hepatocytes. Furthermore, we show that, in contrast to X inactivation, alleles can switch between active and inactive states during the formation of daughter cells. These three genes are the first in their category to exist as a tight cluster, in the proximal region of mouse chromosome 17, providing a thus far unique example of a region of autosomal random monoallelic expression.

Indexed as

Adaptor Proteins, Signal TransducingAllelesGenomeIntracellular Signaling Peptides and ProteinsMicrotubule-Associated ProteinsNerve Tissue ProteinsAnimalsCarrier ProteinsClone CellsFemaleGene DosageGene Expression RegulationGene SilencingGlycoproteinsGTP-Binding ProteinsMaleAdaptor Proteins, Signal TransducingCarrier ProteinsGlycoproteinsGTP-Binding Proteinsinsulin-like growth factor binding protein, acid labile subunitIntracellular Signaling Peptides and ProteinsMAPK8IP3 protein, humanMapk8ip3 protein, mouseMicrotubule-Associated ProteinsNerve Tissue ProteinsNUBP2 protein, mouseNuclear ProteinsPPP1R11 protein, humanUbiquitin-Protein Ligases

Identifiers

PMID11691847
PMCPMC311134

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.