Evidence map›Paper›PMID 11689694›Full record

ArticleMolecular and cellular biology2001

Identification of components of the murine histone deacetylase 6 complex: link between acetylation and ubiquitination signaling pathways.

D Seigneurin-Berny, A Verdel, S Curtet, C Lemercier, J Garin, S Rousseaux, S Khochbin

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In one paragraph

Article in Molecular and cellular biology, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 150 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
150citing papers in PubMed, 1 pooled it
5.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

150 citing papers in PubMed, 1 synthesis or guideline pooled it, 325 citations in OpenAlex.

  1. Pooled it
  2. Trial
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  4. Review
  5. Article
  6. PLAA/UFD-3 regulates P-bodies through its intrinsic disordered domain.Proceedings of the National Academy of Sciences of the United States of America · 2025
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  18. Expression and Crystallization of HDAC6 Tandem Catalytic Domains.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  19. Immunoprecipitation of HDAC6 and Interacting Proteins.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  20. Article

90 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

D Seigneurin-BernyLaboratoire de Biologie Moléculaire et Cellulaire de la Différenciation, INSERM U309, Equipe Chromatine et Expression des Gènes, Institut Albert Bonniot, Faculté de Médecine, Domaine de la Merci, 38706 La Tronche Cedex, France.
A Verdel
S Curtet
C Lemercier
J Garin
S Rousseaux
S Khochbin
Inserm · FRCommissariat à l'Énergie Atomique et aux Énergies Alternatives · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The immunopurification of the endogenous cytoplasmic murine histone deacetylase 6 (mHDAC6), a member of the class II HDACs, from mouse testis cytosolic extracts allowed the identification of two associated proteins. Both were mammalian homologues of yeast proteins known to interact with each other and involved in the ubiquitin signaling pathway: p97/VCP/Cdc48p, a homologue of yeast Cdc48p, and phospholipase A2-activating protein, a homologue of yeast UFD3 (ubiquitin fusion degradation protein 3). Moreover, in the C-terminal region of mHDAC6, a conserved zinc finger-containing domain named ZnF-UBP, also present in several ubiquitin-specific proteases, was discovered and was shown to mediate the specific binding of ubiquitin by mHDAC6. By using a ubiquitin pull-down approach, nine major ubiquitin-binding proteins were identified in mouse testis cytosolic extracts, and mHDAC6 was found to be one of them. All of these findings strongly suggest that mHDAC6 could be involved in the control of protein ubiquitination. The investigation of biochemical properties of the mHDAC6 complex in vitro further supported this hypothesis and clearly established a link between protein acetylation and protein ubiquitination.

Indexed as

AcetylationAdenosine TriphosphatasesAnimalsCell Cycle ProteinsEndopeptidasesEnzyme ActivationHistone Deacetylase 6Histone DeacetylasesMacromolecular SubstancesMaleMiceMolecular Sequence DataProtein BindingProteinsProtein Structure, TertiarySequence Homology, Amino AcidAdenosine TriphosphatasesCell Cycle ProteinsEndopeptidasesHDAC6 protein, humanHdac6 protein, mouseHistone Deacetylase 6Histone DeacetylasesMacromolecular Substancesphospholipase A2-activating proteinProteinsUbiquitinsUbiquitin-Specific ProteasesValosin Containing ProteinVCP protein, humanVcp protein, mouse

Identifiers

PMID11689694
PMCPMC99970
OpenAlexW2125568224

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.