Evidence map›Paper›PMID 11689683›Full record

ArticleMolecular and cellular biology2001

Yeast AMP pathway genes respond to adenine through regulated synthesis of a metabolic intermediate.

K Rébora, C Desmoucelles, F Borne, B Pinson, B Daignan-Fornier

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 95 citations in OpenAlex.

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  15. Dual control of NADeLife · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

K RéboraInstitut de Biochimie et Génétique Cellulaires, CNRS UMR 5095, 33077 Bordeaux Cedex, France.
C Desmoucelles
F Borne
B Pinson
B Daignan-Fornier
Centre National de la Recherche Scientifique · FRInstitut de Biochimie et Génétique Cellulaires · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In Saccharomyces cerevisiae, AMP biosynthesis genes (ADE genes) are transcriptionally activated in the absence of extracellular purines by the Bas1p and Bas2p (Pho2p) transcription factors. We now show that expression of the ADE genes is low in mutant strains affected in the first seven steps of the pathway, while it is constitutively derepressed in mutant strains affected in later steps. Combined with epistasy studies, these results show that 5'-phosphoribosyl-4-succinocarboxamide-5-aminoimidazole (SAICAR), an intermediate metabolite of the pathway, is needed for optimal activation of the ADE genes. Two-hybrid studies establish that SAICAR is required to promote interaction between Bas1p and Bas2p in vivo, while in vitro experiments suggest that the effect of SAICAR on Bas1p-Bas2p interaction could be indirect. Importantly, feedback inhibition by ATP of Ade4p, catalyzing the first step of the pathway, appears to regulate SAICAR synthesis in response to adenine availability. Consistently, both ADE4 dominant mutations and overexpression of wild-type ADE4 lead to deregulation of ADE gene expression. We conclude that efficient transcription of yeast AMP biosynthesis genes requires interaction between Bas1p and Bas2p which is promoted in the presence of a metabolic intermediate whose synthesis is controlled by feedback inhibition of Ade4p acting as the purine nucleotide sensor within the cell.

Indexed as

Homeodomain ProteinsSaccharomyces cerevisiae ProteinsAdenineAdenosine MonophosphateAdenosine TriphosphateAllelesAmidophosphoribosyltransferaseAminoimidazole CarboxamideEpistasis, GeneticFeedback, PhysiologicalFungal ProteinsGenes, DominantMutationProtein BindingRibonucleotidesSaccharomyces cerevisiaeAdenineAdenosine MonophosphateAdenosine TriphosphateAmidophosphoribosyltransferaseAminoimidazole CarboxamideBAS1 protein, S cerevisiaeFungal ProteinsHomeodomain ProteinsPHO2 protein, S cerevisiaeRibonucleotidesSaccharomyces cerevisiae ProteinsSAICARTrans-Activators

Identifiers

PMID11689683
PMCPMC99957
OpenAlexW2164230996

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.