Evidence map›Paper›PMID 11687974›Full record

ArticleOncogene2001

A novel nuclear protein, 5qNCA (LOC51780) is a candidate for the myeloid leukemia tumor suppressor gene on chromosome 5 band q31.

Z Hu, I Gomes, S K Horrigan, J Kravarusic, B Mar, Z Arbieva, B Chyna, N Fulton, S Edassery, A Raza and 1 more

Abstract read
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In one paragraph

Article in Oncogene, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
0.6field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 79 citations in OpenAlex.

  1. The Spectrum and Clinical Impact of Epigenetic Modifier Mutations in Myeloma.Clinical cancer research : an official journal of the American Association for Cancer Research · 2016
    Trial
  2. Review
  3. Article
  4. JMJD5: a multifunctional regulator in development, homeostasis, and cancer.Frontiers in cell and developmental biology · 2026
    Review
  5. Review
  6. Article
  7. Review
  8. Review
  9. Review
  10. Article
  11. Article
  12. JMJD family proteins in cancer and inflammation.Signal transduction and targeted therapy · 2022
    Review
  13. Review
  14. Article
  15. Article
  16. Review
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Z HuSection of Hematology/Oncology, Department of Medicine, University of Illinois at Chicago, Chicago, Illinois 60607-7170, USA.
I Gomes
S K Horrigan
J Kravarusic
B Mar
Z Arbieva
B Chyna
N Fulton
S Edassery
A Raza
C A Westbrook
University of Illinois Chicago · USAvalon Pharma (United States) · USRush University · US

Funding

TUMOR SUPPRESSOR GENES IN SECONDARY MDS AND AMLP01CA075606 · NCI · RUSH UNIVERSITY MEDICAL CENTER · PI RAZA, AZRA · 1997 to 2002
$4.5M
DELETIONS OF CHROMOSOME 5 AND MYELOID MALIGNANCIESR01CA072593 · NCI · UNIVERSITY OF ILLINOIS AT CHICAGO · PI WESTBROOK, CAROL A · 1997 to 2000
$382k
NCI NIH HHS P01-CA-75606NCI NIH HHS R01-CA-72593
6 · The paper itself

Abstract

Interstitial deletion or loss of chromosome 5, del(5q) or -5, is a frequent finding in myeloid leukemias and myelodysplasias, suggesting the presence of a tumor suppressor gene within the deleted region. In our search for this gene, we identified a candidate, 5qNCA (LOC51780), which lies within a consistently-deleted segment of 5q31. 5qNCA expresses a 7.2-kb transcript with a 5286-bp open reading frame which is present at high levels in heart, skeletal muscle, kidney, placenta, and liver as well as CD34+ cells and AML cell lines. 5qNCA encodes a 191-kD nuclear protein which contains a highly-conserved C-terminus containing a zinc finger with the unique spacing Cys-X2-Cys-X7-His-X2-Cys-X2-Cys-X4-Cys-X2-Cys and a jmjC domain, which is often found in proteins that regulate chromatin remodeling. Expression of 5qNCA in a del(5q) cell line results in suppression of clonogenic growth. Preliminary sequence results in AML and MDS samples and cell lines has revealed a possible mutation in the KG-1 cell line resulting in a THR to ALA substitution that has not been found in over 100 normal alleles to date. We propose 5qNCA is a good candidate for the del(5q) tumor suppressor gene based on its predicted function and growth suppressive activities, and suggest that further mutational and functional study of this interesting gene is warranted.

Indexed as

Chromosomes, Human, Pair 5Genes, Tumor SuppressorAcute DiseaseAmino Acid MotifsAmino Acid SequenceCell DivisionCloning, MolecularHumansJumonji Domain-Containing Histone DemethylasesLeukemia, MyeloidMolecular Sequence DataMutationMyelodysplastic SyndromesNuclear ProteinsRNA, NeoplasmSequence Homology, Amino AcidJumonji Domain-Containing Histone DemethylasesKDM3B protein, humanNuclear ProteinsRNA, Neoplasm

Identifiers

PMID11687974
OpenAlexW2031096007

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.