Evidence map›Paper›PMID 11687653›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2001

Internal initiation in Saccharomyces cerevisiae mediated by an initiator tRNA/eIF2-independent internal ribosome entry site element.

S R Thompson, K D Gulyas, P Sarnow

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 78 papers.

0numbers the graph read from it
0cells of the map it votes in
78citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

78 citing papers in PubMed, 128 citations in OpenAlex.

  1. RNAViruses · 2026
    Review
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  16. Translational Control in Virus-Infected Cells.Cold Spring Harbor perspectives in biology · 2019
    Review
  17. Article
  18. Review
  19. Article
  20. Article

18 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

S R ThompsonDepartment of Microbiology and Immunology, Stanford University School of Medicine, Stanford, CA 94305, USA.
K D Gulyas
P Sarnow
Stanford University · US

Funding

TRANSLATIONAL INITIATION IN EUKARYOTIC MRNA MOLECULESR01GM055979 · NIGMS · STANFORD UNIVERSITY · PI SARNOW, PETER · 1996 to 2005
$1.2M
ENTEROVIRUS 71 LEADER: TARGET FOR PEPTIDE INHIBITORSF32AI010485 · NIAID · STANFORD UNIVERSITY · PI THOMPSON, SUNNIE · 2000 to 2002
$119k
INTERNAL TRANSLATION INITIATIONF32GM017766 · NIGMS · UNIVERSITY OF COLORADO DENVER · PI GULYAS, KEITH D · 1995 to 1996
–
NIAID NIH HHS AI10485NIAID NIH HHS F32 AI010485NIGMS NIH HHS F32 GM017766NIGMS NIH HHS GM17766NIGMS NIH HHS GM55979NIGMS NIH HHS R01 GM055979
6 · The paper itself

Abstract

Internal initiation of translation can be mediated by specific internal ribosome entry site (IRES) elements that are located in certain mammalian and viral mRNA molecules. Thus far, these mammalian cellular and viral IRES elements have not been shown to function in the yeast Saccharomyces cerevisiae. We report here that a recently discovered IRES located in the genome of cricket paralysis virus can direct the efficient translation of a second URA3 cistron in dicistronic mRNAs in S. cerevisiae, thereby conferring uracil-independent growth. Curiously, the IRES functions poorly in wild-type yeast but functions efficiently either in the presence of constitutive expression of the eIF2 kinase GCN2 or in cells that have two initiator tRNA(met) genes disrupted. Both of these conditions have been shown to lower the amounts of ternary eIF2-GTP/initiator tRNA(met) complexes. Furthermore, tRNA(met)-independent initiation was also observed in translation-competent extracts prepared from S. cerevisiae in the presence of edeine, a compound that has been shown to interfere with start codon recognition by ribosomal subunits carrying ternary complexes. Therefore, the cricket paralysis virus IRES is likely to recruit ribosomes by internal initiation in S. cerevisiae in the absence of eIF2 and initiator tRNA(met), by the same mechanism of factor-independent ribosome recruitment used in mammalian cells. These findings will allow the use of yeast genetics to determine the mechanism of internal ribosome entry.

Indexed as

Base SequenceDNA PrimersEdeineEukaryotic Initiation Factor-2MutationPhosphorylationProtein KinasesProtein Serine-Threonine KinasesRibosomesRNA, Transfer, MetSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsDNA PrimersEdeineEukaryotic Initiation Factor-2GCN2 protein, S cerevisiaeProtein KinasesProtein Serine-Threonine KinasesRNA, Transfer, MetSaccharomyces cerevisiae Proteins

Identifiers

PMID11687653
PMCPMC60809
OpenAlexW2167104147

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.