Evidence map›Paper›PMID 11680846›Full record

ArticleRNA (New York, N.Y.)2001

Poly(A)-binding proteins regulate both mRNA deadenylation and decapping in yeast cytoplasmic extracts.

C J Wilusz, M Gao, C L Jones, J Wilusz, S W Peltz

Open access · greenAbstract read
In one paragraph

Article in RNA (New York, N.Y.), 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 97 citations in OpenAlex.

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  18. Notch and delta mRNAs in early-stage and mid-stage drosophila embryos exhibit complementary patterns of protein-producing potentials.Developmental dynamics : an official publication of the American Association of Anatomists · 2010
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

C J WiluszDepartment of Molecular Genetics and Microbiology, University of Medicine and Dentistry of New Jersey-Robert Wood Johnson Medical School, Piscataway 08854, USA.
M Gao
C L Jones
J Wilusz
S W Peltz
Johnson University · USRutgers, The State University of New Jersey · US

Funding

COMPLEX INVOLVED IN MRNA DECAY IN YEASTR01GM058276 · NIGMS · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI PELTZ, STUART W · 1999 to 2006
$2.0M
MECHANISM OF REGULATION OF TNF MRNA STABILITYR01CA080062 · NCI · UNIV OF MED/DENT OF NJ-NJ MEDICAL SCHOOL · PI WILUSZ, JEFFREY · 1999 to 2003
$889k
NCI NIH HHS CA80062NIGMS NIH HHS GM58276
6 · The paper itself

Abstract

The pathway of mRNA degradation has been extensively studied in the yeast, Saccharomyces cerevisiae, and it is now clear that many mRNAs decay by a deadenylation-dependent mechanism. Although several of the factors required for mRNA decay have been identified, the regulation and precise roles of many of the proteins involved remains unclear. We have developed an in vitro system that recapitulates both the deadenylation and the decapping steps of mRNA decay. Furthermore, both deadenylation and decapping are inhibited by poly(A) binding proteins in our assay. Our system has allowed us to separate the decay process from translation and we have shown that the poly(A) tail is capable of inhibiting decapping in an eIF4E-independent manner. Our in vitro system should prove invaluable in dissecting the mechanisms of mRNA turnover.

Indexed as

RNA CapsAdenineBase SequenceCytoplasmDNA PrimersPoly(A)-Binding ProteinsRNA-Binding ProteinsRNA, MessengerSaccharomyces cerevisiaeAdenineDNA PrimersPoly(A)-Binding ProteinsRNA-Binding ProteinsRNA CapsRNA, Messenger

Identifiers

PMID11680846
PMCPMC1370185
OpenAlexW2161448011

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.