Evidence map›Paper›PMID 11679352›Full record

ArticleApplied and environmental microbiology2001

Detection of the isiA gene across cyanobacterial strains: potential for probing iron deficiency.

U Geiss, J Vinnemeier, A Kunert, I Lindner, B Gemmer, M Lorenz, M Hagemann, A Schoor

Open access · greenAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 40 citations in OpenAlex.

  1. Coupling of excitation energy to photochemistry in natural marine phytoplankton communities under iron stress.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  2. Article
  3. Biogeography of CyanobacterialFrontiers in microbiology · 2019
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

U GeissInstitut für Okologie, Botanisches Institut, Ernst-Moritz-Arndt-Universität Greifswald, D-17487 Greifswald, Germany.
J Vinnemeier
A Kunert
I Lindner
B Gemmer
M Lorenz
M Hagemann
A Schoor
University of Rostock · DEUniversität Greifswald · DEUniversity of Göttingen · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The use of isiA expression to monitor the iron status of cyanobacteria was investigated. Studies of laboratory cultures of the cyanobacterium Synechocystis sp. strain PCC 6803 showed that isiA expression is dependent on the organism's response to iron deficiency; isiA expression starts as soon as a decline in the rate of growth begins. isiA expression is switched on at concentrations of iron citrate of less than 0.7 microM. A PCR method was developed for the specific amplification of the iron-regulated isiA gene from a variety of cyanobacteria. After we developed degenerate primers, 15 new internal isiA fragments (840 bp) were amplified, cloned, and sequenced from strains obtained from algal collections, from new isolates, and from enriched field samples. Furthermore, isiA expression could be detected by means of reverse transcription-PCR when enriched field samples were exposed to restricted iron availability. These results imply that determining the level of iron-regulated isiA expression can serve to indicate iron deficiency in cyanobacterial samples of differing origins from the field.

Indexed as

Gene Expression Regulation, BacterialLight-Harvesting Protein ComplexesPhotosystem II Protein ComplexBacterial ProteinsCarrier ProteinsCyanobacteriaIronMolecular Sequence DataPhotosynthetic Reaction Center Complex ProteinsPolymerase Chain ReactionPromoter Regions, GeneticSequence Analysis, DNABacterial ProteinsCarrier Proteinschlorophyll A binding protein CP43, CyanobacteriaIronLight-Harvesting Protein ComplexesPhotosynthetic Reaction Center Complex Proteinsphotosystem II, chlorophyll binding protein, CP-43Photosystem II Protein Complex

Identifiers

PMID11679352
PMCPMC93297
OpenAlexW2151642145

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.