Evidence map›Paper›PMID 11675486›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2001

J3-crystallin of the jellyfish lens: similarity to saposins.

J Piatigorsky, B Norman, L J Dishaw, L Kos, J Horwitz, P J Steinbach, Z Kozmik

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 50 citations in OpenAlex.

  1. Review
  2. Comparative analysis of the structure and crystallin composition of the lenses of freshwater fish and gastropods with respect to their vision.Journal of comparative physiology. A, Neuroethology, sensory, neural, and behavioral physiology · 2025
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Evolution of graded refractive index in squid lenses.Journal of the Royal Society, Interface · 2007
    Article
  10. Diversity and functional plasticity of eukaryotic selenoproteins: identification and characterization of the SelJ family.Proceedings of the National Academy of Sciences of the United States of America · 2005
    Article
  11. Review
  12. Vertebrate-like betagamma-crystallins in the ocular lenses of a copepod.Journal of comparative physiology. A, Neuroethology, sensory, neural, and behavioral physiology · 2005
    Article
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

J PiatigorskyLaboratory of Molecular and Developmental Biology, National Eye Institute, and Center for Molecular Modeling, Center for Information Technology, National Institutes of Health, Bethesda, MD 20892, USA. joramp@nei.nih.gov
B Norman
L J Dishaw
L Kos
J Horwitz
P J Steinbach
Z Kozmik
National Eye Institute · USCenter for Information Technology · USNational Institutes of Health · US

Funding

Simulating Protein Structures, Complexes, And DynamicsZIACT000265 · CIT · CENTER FOR INFORMATION TECHNOLOGY · PI STEINBACH, PETER J · 2009 to 2020
$8.2M
CRYSTALLIN GENES--STRUCTURE, ORGANIZATION, EXPRESSION, AND EVOLUTIONZ01EY000126 · NEI · NATIONAL EYE INSTITUTE · PI PIATIGORSKY, JORAM · 1985 to 2008
$2.2M
SIMULATING PROTEIN STRUCTURES, COMPLEXES, AND DYNAMICSZ01CT000265 · CIT · COMPUTER RESEARCH AND TECHNOLOGY · PI STEINBACH, PETER J · 1997 to 2008
$1.3M
6 · The paper itself

Abstract

J3-crystallin, one of the three major eye-lens proteins of the cubomedusan jellyfish (Tripedalia cystophora), shows similarity to vertebrate saposins, which are multifunctional proteins that bridge lysosomal hydrolases to lipids and activate enzyme activity. Sequence alignment of deduced J3-crystallin indicates two saposin-like motifs arranged in tandem, each containing six cysteines characteristic of this protein family. The J3-crystallin cDNA encodes a putative precursor analogous to vertebrate prosaposins. The J3-crystallin gene has seven exons, with exons 2-4 encoding the protein. Exon 3 encodes a circularly permutated saposin motif, called a swaposin, found in plant aspartic proteases. J3-crystallin RNA was found in the cubomedusan lens, statocyst, in bands radiating from the pigmented region of the ocellus, in the tentacle tip by in situ hybridization, and in the embryo and larva by reverse transcription-PCR. Our data suggest a crystallin role for the multifunctional saposin protein family in the jellyfish lens. This finding extends the gene sharing evolutionary strategy for lens crystallins to the cnidarians and indicates that the putative primordial saposin/swaposin J3-crystallin reflects both the chaperone and enzyme connections of the vertebrate crystallins.

Indexed as

Amino Acid SequenceAnimalsBase SequenceCrystallinsDNA, ComplementaryGlycoproteinsMolecular Sequence DataRNA, MessengerSaposinsScyphozoaSphingolipid Activator ProteinsCrystallinsDNA, ComplementaryGlycoproteinsRNA, MessengerSaposinsSphingolipid Activator Proteins

Identifiers

PMID11675486
PMCPMC60059
OpenAlexW2160716144

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.