Evidence map›Paper›PMID 11599568›Full record

ArticleCell stress & chaperones2001

Stress induction of Bm1 RNA in silkworm larvae: SINEs, an unusual class of stress genes.

R H Kimura, P V Choudary, K K Stone, C W Schmid

Open access · greenAbstract read
In one paragraph

Article in Cell stress & chaperones, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 43 citations in OpenAlex.

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  9. Transcription and activation under environmental stress of the complex telomeric repeats of Chironomus thummi.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2008
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

R H KimuraDepartment of Chemistry, University of California, Davis 95616, USA.
P V Choudary
K K Stone
C W Schmid
University of California, Davis · US

Funding

REPETITIVE DNA SEQUENCES IN THE HUMAN GENOMER01GM021346 · NIGMS · UNIVERSITY OF CALIFORNIA DAVIS · PI SCHMID, CARL W · 1985 to 2002
$808k
NIGMS NIH HHS GM21346NIGMS NIH HHS R01 GM021346
6 · The paper itself

Abstract

This study surveys the induction of RNA polymerase III (Pol III)-directed expression of short interspersed element (SINE) transcripts by various stresses in an animal model, silkworm larvae. Sublethal heat shock and exposure to several toxic compounds increase the level of Bm1 RNA, the silkworm SINE transcript, while also transiently increasing expression of a well-characterized stress-induced transcript, Hsp70 messenger RNA (mRNA). In certain cases, the Bm1 RNA response coincides with that of Hsp70 mRNA, but more often Bm1 RNA responds later in recovery. Baculovirus infection and exposure to certain toxic compounds increase Bm1 RNA but not Hsp70 mRNA, showing that SINE induction is not necessarily coupled to transcription of this particular heat shock gene. SINEs behave as an additional class of stress-inducible genes in living animals but are unusual as stress genes because of their high copy number, genomic dispersion, and Pol III-directed transcription.

Indexed as

AnimalsArsenitesBaculoviridaeBlotting, NorthernBombyxCatecholsCycloheximideEnzyme InhibitorsGene Expression RegulationHeat-Shock ProteinsHumansInsect ProteinsMercuryProtein Synthesis InhibitorsRNA, MessengerShort Interspersed Nucleotide ElementsArsenitescatecholCatecholsCycloheximideEnzyme InhibitorsHeat-Shock ProteinsInsect ProteinsMercuryProtein Synthesis InhibitorsRNA, Messengersodium arseniteSodium CompoundsTarstobacco tar

Identifiers

PMID11599568
PMCPMC434408
OpenAlexW2202244239

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.