Evidence map›Paper›PMID 11592999›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2001

Photochemically enhanced binding of small molecules to the tumor necrosis factor receptor-1 inhibits the binding of TNF-alpha.

P H Carter, P A Scherle, J K Muckelbauer, M E Voss, R Q Liu, L A Thompson, A J Tebben, K A Solomon, Y C Lo, Z Li and 17 more

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 138 citations in OpenAlex.

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  11. Glycine is a competitive antagonist of the TNF receptor mediating the expression of inflammatory cytokines in 3T3-L1 adipocytes.Inflammation research : official journal of the European Histamine Research Society ... [et al.] · 2021
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4 · The record

Corrections and comments

  • Erratum issued
    Muckelbauer JA [corrected to Muckelbauer JK]
5 · Who and what money

Authors and funding

27 authors at 2 institutions in 1 country.

P H CarterDuPont Pharmaceuticals Company, Experimental Station, Wilmington, DE 19880-0500, USA. percy.h.carter@dupontpharma.com
P A Scherle
J K Muckelbauer
M E Voss
R Q Liu
L A Thompson
A J Tebben
K A Solomon
Y C Lo
Z Li
P Strzemienski
G Yang
N Falahatpisheh
M Xu
Z Wu
N A Farrow
K Ramnarayan
J Wang
D Rideout
V Yalamoori
P Domaille
D J Underwood
J M Trzaskos
S M Friedman
R C Newton
C P Decicco
J A Muckelbauer
DuPont (United States) · USScripps Research Institute · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The binding of tumor necrosis factor alpha (TNF-alpha) to the type-1 TNF receptor (TNFRc1) plays an important role in inflammation. Despite the clinical success of biologics (antibodies, soluble receptors) for treating TNF-based autoimmune conditions, no potent small molecule antagonists have been developed. Our screening of chemical libraries revealed that N-alkyl 5-arylidene-2-thioxo-1,3-thiazolidin-4-ones were antagonists of this protein-protein interaction. After chemical optimization, we discovered IW927, which potently disrupted the binding of TNF-alpha to TNFRc1 (IC(50) = 50 nM) and also blocked TNF-stimulated phosphorylation of Ikappa-B in Ramos cells (IC(50) = 600 nM). This compound did not bind detectably to the related cytokine receptors TNFRc2 or CD40, and did not display any cytotoxicity at concentrations as high as 100 microM. Detailed evaluation of this and related molecules revealed that compounds in this class are "photochemically enhanced" inhibitors, in that they bind reversibly to the TNFRc1 with weak affinity (ca. 40-100 microM) and then covalently modify the receptor via a photochemical reaction. We obtained a crystal structure of IV703 (a close analog of IW927) bound to the TNFRc1. This structure clearly revealed that one of the aromatic rings of the inhibitor was covalently linked to the receptor through the main-chain nitrogen of Ala-62, a residue that has already been implicated in the binding of TNF-alpha to the TNFRc1. When combined with the fact that our inhibitors are reversible binders in light-excluded conditions, the results of the crystallography provide the basis for the rational design of nonphotoreactive inhibitors of the TNF-alpha-TNFRc1 interaction.

Indexed as

Antigens, CDCrystallography, X-RayHumansModels, MolecularMolecular StructureMorpholinesPhotochemistryReceptors, Tumor Necrosis FactorReceptors, Tumor Necrosis Factor, Type IRecombinant ProteinsTumor Necrosis Factor-alphaAntigens, CDIV 703 cpdIW 927 cpdMorpholinesReceptors, Tumor Necrosis FactorReceptors, Tumor Necrosis Factor, Type IRecombinant ProteinsTumor Necrosis Factor-alpha

Identifiers

PMID11592999
PMCPMC59736
OpenAlexW2143183589

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.