Evidence map›Paper›PMID 11581402›Full record

ArticleJournal of virology2001

Identification of acidic and aromatic residues in the Zta activation domain essential for Epstein-Barr virus reactivation.

Z Deng, C J Chen, D Zerby, H J Delecluse, P M Lieberman

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In one paragraph

Article in Journal of virology, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
0.5field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 30 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 3 countries.

Z DengThe Wistar Institute, Philadelphia, Pennsylvania 19104, USA.
C J Chen
D Zerby
H J Delecluse
P M Lieberman
The Wistar Institute · USUniversity of Birmingham · GB

Funding

Functions of the General Coactivator TFIIAR01GM054687 · NIGMS · WISTAR INSTITUTE · PI LIEBERMAN, PAUL M. · 1996 to 2005
$1.5M
NIGMS NIH HHS GM 54687NIGMS NIH HHS R01 GM054687
6 · The paper itself

Abstract

Epstein-Barr virus (EBV) lytic cycle transcription and DNA replication require the transcriptional activation function of the viral immediate-early protein Zta. We describe a series of alanine substitution mutations in the Zta activation domain that reveal two functional motifs based on amino acid composition. Alanine substitution of single or paired hydrophobic aromatic amino acid residues resulted in modest transcription activation defects, while combining four substitutions of aromatic residues (F22/F26/W74/F75) led to more severe transcription defects. Substitution of acidic amino acid residue E27, D35, or E54 caused severe transcription defects on most viral promoters. Promoter- and cell-specific defects were observed for some substitution mutants. Aromatic residues were required for Zta interaction with TFIIA-TFIID and the CREB-binding protein (CBP) and for stimulation of CBP histone acetyltransferase activity in vitro. In contrast, acidic amino acid substitution mutants interacted with TFIIA-TFIID and CBP indistinguishably from the wild type. The nuclear domain 10 (ND10) protein SP100 was dispersed by most Zta mutants, but acidic residue mutations led to reduced, while aromatic substitution mutants led to increased SP100 nuclear staining. Acidic residue substitution mutants had more pronounced defects in transcription activation of endogenous viral genes in latently infected cells and for viral replication, as measured by the production of infectious virus. One mutant, K12/F13, was incapable of stimulating EBV lytic replication but had only modest transcription defects. These results indicate that Zta stimulates viral reactivation through two nonredundant structural motifs, one of which interacts with general transcription factors and coactivators, and the other has an essential but as yet not understood function in lytic transcription.

Indexed as

Saccharomyces cerevisiae ProteinsViral ProteinsVirus ActivationAcetyltransferasesCREB-Binding ProteinDNA-Binding ProteinsDNA ReplicationHerpesvirus 4, HumanHistone AcetyltransferasesNuclear ProteinsPromoter Regions, GeneticTrans-ActivatorsTranscriptional ActivationTranscription FactorsTranscription Factors, TFIITranscription Factor TFIIAAcetyltransferasesBZLF1 protein, Herpesvirus 4, HumanCREB-Binding ProteinDNA-Binding ProteinsHistone AcetyltransferasesNuclear ProteinsSaccharomyces cerevisiae ProteinsTrans-ActivatorsTranscription FactorsTranscription Factors, TFIITranscription Factor TFIIATranscription Factor TFIIDViral Proteins

Identifiers

PMID11581402
PMCPMC114608
OpenAlexW1969084999

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.