Evidence map›Paper›PMID 11581386›Full record

ArticleJournal of virology2001

A commonly recognized simian immunodeficiency virus Nef epitope presented to cytotoxic T lymphocytes of Indian-origin rhesus monkeys by the prevalent major histocompatibility complex class I allele Mamu-A*02.

S Robinson, W A Charini, M H Newberg, M J Kuroda, C I Lord, N L Letvin

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.9field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 28 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

S RobinsonBeth Israel Deaconess Medical Center, Harvard Medical School, Boston, Massachusetts 02215, USA.
W A Charini
M H Newberg
M J Kuroda
C I Lord
N L Letvin
Beth Israel Deaconess Medical Center · USHarvard University · US

Funding

DFCI-BIDMC-CH CENTER FOR AIDS RESEARCHP30AI028691 · NIAID · DANA-FARBER CANCER INSTITUTE · PI SODROSKI, JOSEPH G · 1989 to 2003
$6.2M
IMMUNOREGULATION IN AIDSR01AI020729 · NIAID · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI LETVIN, NORMAN L · 1985 to 2008
$3.1M
IMMUNOREGULATION IN AIDSR37AI020729 · NIAID · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI LETVIN, NORMAN L · 1993 to 2002
$1.6M
PRIMATE IMMUNOLOGY LABORATORY FOR AIDS VACCINE R&DN01AI085343 · NIAID · BETH ISRAEL DEACONESS MEDICAL CENTER · PI LETVIN, NORMAN L · 1998 to 2000
$412k
NIAID NIH HHS AI20729NIAID NIH HHS AI28691NIAID NIH HHS AI85343NIAID NIH HHS P30 AI028691NIAID NIH HHS R01 AI020729NIAID NIH HHS R37 AI020729
6 · The paper itself

Abstract

The ability to monitor vaccine-elicited CD8(+) cytotoxic T-lymphocyte (CTL) responses in simian immunodeficiency virus (SIV)- and simian-human immunodeficiency virus (SHIV)-infected rhesus monkeys has been limited by our knowledge of viral epitopes predictably presented to those lymphocytes by common rhesus monkey MHC class I alleles. We now define an SIV and SHIV Nef CTL epitope (YTSGPGIRY) that is presented to CD8(+) T lymphocytes by the common rhesus monkey MHC class I molecule Mamu-A*02. All seven infected Mamu-A*02(+) monkeys evaluated demonstrated this response, and peptide-stimulated interferon gamma Elispot assays indicated that the response represents a large proportion of the entire CD8(+) T-lymphocyte SIV- or SHIV-specific immune response of these animals. Knowledge of this epitope and MHC class I allele substantially increases the number of available rhesus monkeys that can be used for testing prototype HIV vaccines in this important animal model.

Indexed as

AllelesGenes, MHC Class IAmino Acid SequenceAnimalsEpitopesGene Products, nefHistocompatibility Antigens Class IMacaca mulattaMolecular Sequence DataSimian Immunodeficiency VirusT-Lymphocytes, CytotoxicEpitopesGene Products, nefHistocompatibility Antigens Class IMamu-A 02 antigen

Identifiers

PMID11581386
PMCPMC114592
OpenAlexW2111866939

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.