Evidence map›Paper›PMID 11564886›Full record

ArticleMolecular and cellular biology2001

Induction of distinct [URE3] yeast prion strains.

M Schlumpberger, S B Prusiner, I Herskowitz

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 94 papers.

0numbers the graph read from it
0cells of the map it votes in
94citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

94 citing papers in PubMed, 153 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. Review
  8. Antiprion systems in yeast cooperate to cure or prevent the generation of nearly all [Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  9. Structural Bases of Prion Variation in Yeast.International journal of molecular sciences · 2022
    Review
  10. Review
  11. Article
  12. Article
  13. Extracellular Vesicles and the Propagation of Yeast Prions.Current topics in microbiology and immunology · 2021
    Article
  14. Review
  15. Article
  16. Mechanisms for Curing Yeast Prions.International journal of molecular sciences · 2020
    Review
  17. Article
  18. How Do Yeast Cells Contend with Prions?International journal of molecular sciences · 2020
    Review
  19. The role of prion strain diversity in the development of successful therapeutic treatments.Progress in molecular biology and translational science · 2020
    Review
  20. Article

34 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 3 countries.

M SchlumpbergerInstitute for Neurodegenerative Diseases, University of California, San Francisco, California 94143-0518, USA.
S B Prusiner
I Herskowitz
University of California, San Francisco · USGerman Center for Neurodegenerative Diseases · DE

Funding

VIRAL DEGENERATIVE DEMENTING DISEASE IN AGING (SUPP)P01AG002132 · NIA · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI SALI, ANDREJ · 1985 to 2024
$51.7M
SYNTHETIC AND RECOMBINANT PRP PEPTIDES AND PROTEINSP01AG010770 · NIA · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI PRUSINER, STANLEY B · 1993 to 2015
$30.3M
TRANSGENIC STUDIES OF SCRAPIE "STRAINS" AND CNS DEGENERATION BY MUTANT PRP GENESP50NS014069 · NINDS · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI PRUSINER, STANLEY B · 1994 to 2002
$4.2M
GENETIC CONTROL OF MATING IN YEASTR01GM059466 · NIGMS · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI KORNBERG, THOMAS B. · 1999 to 2002
$822k
PURIFICATION AND MOLECULAR STRUCTURE OF THE SCRAPIE AGENTP01NS014069 · NINDS · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI PRUSINER, STANLEY B · 1985 to 1993
–
NIA NIH HHS AG02132NIA NIH HHS AG10770NIA NIH HHS P01 AG002132NIA NIH HHS P01 AG010770NIGMS NIH HHS GM59466NINDS NIH HHS NS14069
6 · The paper itself

Abstract

[URE3] is a non-Mendelian genetic element in Saccharomyces cerevisiae, which is caused by a prion-like, autocatalytic conversion of the Ure2 protein (Ure2p) into an inactive form. The presence of [URE3] allows yeast cells to take up ureidosuccinic acid in the presence of ammonia. This phenotype can be used to select for the prion state. We have developed a novel reporter, in which the ADE2 gene is controlled by the DAL5 regulatory region, which allows monitoring of Ure2p function by a colony color phenotype. Using this reporter, we observed induction of different [URE3] prion variants ("strains") following overexpression of the N-terminal Ure2p prion domain (UPD) or full-length Ure2p. Full-length Ure2p induced two types of [URE3]: type A corresponds to conventional [URE3], whereas the novel type B variant is characterized by relatively high residual Ure2p activity and efficient curing by coexpression of low amounts of a UPD-green fluorescent protein fusion protein. Overexpression of UPD induced type B [URE3] but not type A. Both type A and B [URE3] strains, as well as weak and strong isolates of type A, were shown to stably maintain different prion strain characteristics. We suggest that these strain variants result from different modes of aggregation of similar Ure2p monomers. We also demonstrate a procedure to counterselect against the [URE3] state.

Indexed as

Saccharomyces cerevisiae ProteinsEndopeptidase KFungal ProteinsGenes, ReporterGenetic TechniquesGlutathione PeroxidaseGuanidineModels, GeneticPhenotypePlasmidsPrionsProtein Structure, TertiarySaccharomyces cerevisiaeEndopeptidase KFungal ProteinsGlutathione PeroxidaseGuanidinePrionsSaccharomyces cerevisiae ProteinsURE2 protein, S cerevisiae

Identifiers

PMID11564886
PMCPMC99879
OpenAlexW2103884669

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.