Evidence map›Paper›PMID 11562354›Full record

ArticleGenes & development2001

The Swi5 activator recruits the Mediator complex to the HO promoter without RNA polymerase II.

L T Bhoite, Y Yu, D J Stillman

Abstract read
In one paragraph

Article in Genes & development, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 79 papers.

0numbers the graph read from it
0cells of the map it votes in
79citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

79 citing papers in PubMed.

  1. Article
  2. Beyond the mono-nucleosome.Biochemical Society transactions · 2025
    Review
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  5. Cyclin-dependent kinases: Masters of the eukaryotic universe.Wiley interdisciplinary reviews. RNA · 2023
    Review
  6. Article
  7. Article
  8. Article
  9. The role of mediator complex subunit 19 in human diseases.Experimental biology and medicine (Maywood, N.J.) · 2021
    Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Nucleosomes inhibit target cleavage by CRISPR-Cas9 in vivo.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

19 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

L T BhoiteDepartment of Pathology, University of Utah Health Sciences Center, Salt Lake City, Utah 84132, USA.
Y Yu
D J Stillman

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Regulation of HO gene expression in the yeast Saccharomyces cerevisiae is intricately orchestrated by an assortment of gene-specific DNA-binding and non-DNA binding regulators. Binding of the early G1 transcription factor Swi5 to the distal URS1 element of the HO promoter initiates a cascade of events through recruitment of the Swi/Snf and SAGA complexes. In late G1, binding of transcription factor SBF to promoter proximal sequences results in the timely expression of HO. In this work we describe an important additional layer of complexity to the current model by identifying a connection between Swi5 and the Mediator/RNA polymerase II holoenzyme complex. We show that Swi5 recruits Mediator to HO by specific interaction with the Gal11 module of the Mediator complex. Importantly, binding of both the Gal11 and Srb4 mediator components to the upstream region of HO is independent of the SBF factor. Swi/Snf is required for Mediator binding, and genetic suppression experiments suggest that Swi/Snf and Mediator act in the same genetic pathway of HO activation. Experiments examining the kinetics of binding show that Mediator binds to HO promoter elements 1.5 kb upstream of the transcription start site in early G1, but this binding occurs without RNA Pol II. RNA Pol II does not bind to HO until late G1, when HO is actively transcribed, and binding occurs exclusively to the TATA region.

Indexed as

Cell Cycle ProteinsDNA-Binding ProteinsPromoter Regions, GeneticSaccharomyces cerevisiae ProteinsFungal ProteinsGene Expression Regulation, FungalMediator ComplexProtein BindingRNA Polymerase IISaccharomyces cerevisiaeTATA BoxTrans-ActivatorsTranscription FactorsTranscription, GeneticCell Cycle ProteinsDNA-Binding ProteinsFungal ProteinsGAL11 protein, S cerevisiaeMediator ComplexRNA Polymerase IISaccharomyces cerevisiae ProteinsSRB4 protein, S cerevisiaeSWI5 protein, S cerevisiaeTrans-ActivatorsTranscription Factors

Identifiers

PMID11562354
PMCPMC312787

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.