Evidence map›Paper›PMID 11560998›Full record

ArticleThe Journal of experimental medicine2001

Structural features of peptide analogs of human histocompatibility leukocyte antigen class I epitopes that are more potent and immunogenic than wild-type peptide.

S Tangri, G Y Ishioka, X Huang, J Sidney, S Southwood, J Fikes, A Sette

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of experimental medicine, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 145 citations in OpenAlex.

  1. Trial
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  6. Isolation and characterization ofSaudi journal of biological sciences · 2023
    Article
  7. Thioamide Analogues of MHC I Antigen Peptides.Journal of the American Chemical Society · 2023
    Article
  8. EnhancedJournal of virology · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

S TangriEpimmune Incorporated, San Diego, CA 92121, USA.
G Y Ishioka
X Huang
J Sidney
S Southwood
J Fikes
A Sette
Epic Sciences (United States) · US

Funding

BAA-APPLICATION OF HLA DATA TO DEVELOP &IMPROVE VACCINEN01AI095362 · NIAID · IDM PHARMA, INC. · PI SETTE, ALESSANDRO · 1999 to 2000
$449k
NIAID NIH HHS N01 AI095362NIAID NIH HHS N01-AI-95362
6 · The paper itself

Abstract

Certain peptide analogs that carry substitutions at residues other than the main major histocompatibility complex anchors and are surprisingly much more antigenic than wild-type peptide (heteroclitic analogs). To date, it was unknown how frequently wild-type epitopes could be modified to obtain heteroclitic activity. In this study, we analyzed a large panel of analogs of two different human histocompatibility leukocyte antigen (HLA)-A2.1-restricted epitopes and found that heteroclitic analogs were associated with higher magnitude responses and increased (up to 10(7)-fold) sensitivity to antigen, and corresponded to conservative or semiconservative substitutions at odd-numbered positions in the middle of the peptide (positions 3, 5, or 7). These findings were validated by performing additional immunogenicity studies in murine and human systems with four additional epitopes. The biological relevance of heteroclitic analogs was underlined when predicted analogs of the p53.261 epitope was shown to induce cytotoxic T lymphocytes (CTLs) that recognize low concentrations of peptide (high avidity) in vivo and demonstrate in vitro antitumor recognition. Finally, in vitro immunization of human peripheral blood mononuclear cells with two heteroclitic analogs resulted in recruitment of more numerous CTLs which were associated with increased antigen sensitivity. In conclusion, heteroclitic analogs were identified in each of the six cases studied and structural features were defined which allow identification of such analogs. The strong CTL immunity elicited by heteroclitic epitopes suggest that they could be of significant value in vaccination against tolerant or weakly immunogenic tumor-associated and viral antigens.

Indexed as

AnimalsCarcinoembryonic AntigenEpitopes, T-LymphocyteGene Products, polHepatitis B Core AntigensHepatitis B virusHistocompatibility Antigens Class IHIV-1HLA-A2 AntigenHT29 CellsHumansInterferon-gammaInterleukin-10Interleukin-5Jurkat CellsMiceCarcinoembryonic AntigenEpitopes, T-LymphocyteGene Products, polHepatitis B Core AntigensHistocompatibility Antigens Class IHLA-A2 AntigenInterferon-gammaInterleukin-10Interleukin-5Peptides

Identifiers

PMID11560998
PMCPMC2195959
OpenAlexW1980958970

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.