Evidence map›Paper›PMID 11549766›Full record

ArticleThe Plant cell2001

The Arabidopsis TT2 gene encodes an R2R3 MYB domain protein that acts as a key determinant for proanthocyanidin accumulation in developing seed.

N Nesi, C Jond, I Debeaujon, M Caboche, L Lepiniec

Open access · greenAbstract read
In one paragraph

Article in The Plant cell, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 378 papers.

0numbers the graph read from it
0cells of the map it votes in
378citing papers in PubMed
6.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

378 citing papers in PubMed, 822 citations in OpenAlex.

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  8. Horticulture research · 2026
    Article
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  15. The Mechanism of TT2-TypePlants (Basel, Switzerland) · 2025
    Article
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  18. Article
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318 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

N NesiLaboratoire de Biologie des Semences, Unité Mixte de Recherche, Institut National de la Recherche Agronomique, Centre de Versailles, Route de Saint-Cyr, 78026 Versailles Cedex, France.
C Jond
I Debeaujon
M Caboche
L Lepiniec
Institut National de la Recherche Agronomique · MA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In Arabidopsis, proanthocyanidins specifically accumulate in the endothelium during early seed development. At least three TRANSPARENT TESTA (TT) genes, TT2, TT8, and TTG1, are necessary for the normal expression of several flavonoid structural genes in immature seed, such as DIHYDROFLAVONOL-4-REDUCTASE and BANYULS (BAN). TT8 and TTG1 were characterized recently and found to code for a basic helix-loop-helix domain transcription factor and a WD-repeat-containing protein, respectively. Here the molecular cloning of the TT2 gene was achieved by T-DNA tagging. TT2 encoded an R2R3 MYB domain protein with high similarity to the rice OsMYB3 protein and the maize COLORLESS1 factor. A TT2-green fluorescent protein fusion protein was located mostly in the nucleus, in agreement with the regulatory function of the native TT2 protein. TT2 expression was restricted to the seed during early embryogenesis, consistent with BAN expression and the proanthocyanidin deposition profile. Finally, in gain-of-function experiments, TT2 was able to induce ectopic expression of BAN in young seedlings and roots in the presence of a functional TT8 protein. Therefore, our results strongly suggest that stringent spatial and temporal BAN expression, and thus proanthocyanidin accumulation, are determined at least partially by TT2.

Indexed as

ProanthocyanidinsAllelesAmino Acid SequenceAnthocyaninsArabidopsisArabidopsis ProteinsBase SequenceBasic Helix-Loop-Helix ProteinsCell NucleusCloning, MolecularDNA-Binding ProteinsEvolution, MolecularFlavonoidsGene Expression Regulation, DevelopmentalGene Expression Regulation, PlantGenes, PlantAnthocyaninsArabidopsis ProteinsBasic Helix-Loop-Helix ProteinsDNA-Binding ProteinsFlavonoidsNuclear ProteinsproanthocyanidinProanthocyanidinsProto-Oncogene Proteins c-mybTranscription FactorsTT2 protein, ArabidopsisTT8 protein, Arabidopsis

Identifiers

PMID11549766
PMCPMC139454
OpenAlexW2164473028

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.