Evidence map›Paper›PMID 11535637›Full record

ArticleThe Journal of experimental medicine2001

The biological activity of natural and mutant pTalpha alleles.

D Gibbons, N C Douglas, D F Barber, Q Liu, R Sullo, L Geng, H J Fehling, H von Boehmer, A C Hayday

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of experimental medicine, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 29 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

D GibbonsGuy's King's St. Thomas' Medical School, Guy's Hospital, London Bridge, London SE1 9RT, United Kingdom.
N C Douglas
D F Barber
Q Liu
R Sullo
L Geng
H J Fehling
H von Boehmer
A C Hayday
Yale University · USKing's College Hospital · GBDana-Farber Cancer Institute · USGuy's Hospital · GB

Funding

REGULATION OF T-CELL RECEPTOR GENE DIFFERENTIATIONR01GM037759 · NIGMS · YALE UNIVERSITY · PI HAYDAY, ADRIAN CLIVE · 1987 to 2000
$250k
NIGMS NIH HHS GM37759
6 · The paper itself

Abstract

beta selection is a major checkpoint in early thymocyte differentiation, mediated by successful expression of the pre-T cell receptor (TCR) comprising the TCRbeta chain, CD3 proteins, and a surrogate TCRalpha chain, pTalpha. The mechanism of action of the pre-TCR is unresolved. In humans and mice, the pTalpha gene encodes two RNAs, pTalpha(a), and a substantially truncated form, pTalpha(b). This study shows that both are biologically active in their capacity to rescue multiple thymocyte defects in pTalpha(-/-) mice. Further active alleles of pTalpha include one that lacks both the major ectodomain and much of the long cytoplasmic tail (which is unique among antigen receptor chains), and another in which the cytoplasmic tail is substituted with the short tail of TCR Calpha. Thus, very little of the pTalpha chain is required for function. These data support a hypothesis that the primary role of pTalpha is to stabilize the pre-TCR, and that much of the conserved structure of pTalpha probably plays a critical regulatory role.

Indexed as

Genes, T-Cell Receptor alphaAnimalsBase SequenceDNA PrimersFlow CytometryMiceMice, KnockoutMice, TransgenicMolecular Sequence DataMutagenesisPhenotypePolymerase Chain ReactionProtein Kinase CReceptor-CD3 Complex, Antigen, T-CellReceptors, Antigen, T-Cell, alpha-betaRecombinant ProteinsDNA PrimersProtein Kinase CReceptor-CD3 Complex, Antigen, T-CellReceptors, Antigen, T-Cell, alpha-betaRecombinant Proteins

Identifiers

PMID11535637
PMCPMC2195948
OpenAlexW2101709582

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.