Evidence map›Paper›PMID 11532956›Full record

ArticleThe EMBO journal2001

Purification, cloning and characterization of a GPI inositol deacylase from Trypanosoma brucei.

M L Güther, S Leal, N A Morrice, G A Cross, M A Ferguson

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in The EMBO journal, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
  2. Article
  3. Crystal structure of the mammalian lipopolysaccharide detoxifier.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Trypanosome glycosylphosphatidylinositol biosynthesis.The Korean journal of parasitology · 2009
    Review
  10. Review
  11. Review
  12. Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

M L GütherDivision of Biological Chemistry and Molecular Microbiology, The Wellcome Trust Biocentre, Dundee DD1 5EH, UK.
S Leal
N A Morrice
G A Cross
M A Ferguson
University of Dundee · GB

Funding

Wellcome Trust
6 · The paper itself

Abstract

Inositol acylation is an obligatory step in glycosylphosphatidylinositol (GPI) biosynthesis whereas mature GPI anchors often lack this modification. The GPI anchors of Trypanosoma brucei variant surface glycoproteins (VSGs) undergo rounds of inositol acylation and deacylation during GPI biosynthesis and the deacylation reactions are inhibited by diisopropylfluorophosphate (DFP). Inositol deacylase was affinity labelled with [3H]DFP and purified. Peptide sequencing was used to clone GPIdeAc, which encodes a protein with significant sequence and hydropathy similarity to mammalian acyloxyacyl hydrolase, an enzyme that removes fatty acids from bacterial lipopolysaccharide. Both contain a signal sequence followed by a saposin domain and a GDSL-lipase domain. GPIdeAc(-/-) trypanosomes were viable in vitro and in animals. Affinity-purified HA-tagged GPIdeAc was shown to have inositol deacylase activity. However, total inositol deacylase activity was only reduced in GPIdeAc(-/-) trypanosomes and the VSG GPI anchor was indistinguishable from wild type. These results suggest that there is redundancy in T.brucei inositol deacylase activity and that there is another enzyme whose sequence is not recognizably related to GPIdeAc.

Indexed as

Protozoan Proteins3' Untranslated Regions5' Untranslated RegionsAmino Acid SequenceAnimalsCloning, MolecularGlycosylphosphatidylinositolsHumansIsoflurophateMiceMolecular Sequence DataPeptide FragmentsPhosphoric Monoester HydrolasesPolymerase Chain ReactionRabbitsRats3' Untranslated Regions5' Untranslated RegionsGlycosylphosphatidylinositolsGPIdeAc protein, Trypanosoma bruceiIsoflurophatePeptide FragmentsPhosphoric Monoester HydrolasesProtozoan ProteinsRecombinant ProteinsTrypsin

Identifiers

PMID11532956
PMCPMC125599
OpenAlexW2068224016

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.