Evidence map›Paper›PMID 11532937›Full record

ArticleThe EMBO journal2001

Ara6, a plant-unique novel type Rab GTPase, functions in the endocytic pathway of Arabidopsis thaliana.

T Ueda, M Yamaguchi, H Uchimiya, A Nakano

Open access · greenAbstract read
In one paragraph

Article in The EMBO journal, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 222 papers.

0numbers the graph read from it
0cells of the map it votes in
222citing papers in PubMed
6.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

222 citing papers in PubMed, 482 citations in OpenAlex.

  1. ROP meets RAB at crossroads.Nature plants · 2026
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  8. AFrontiers in plant science · 2026
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  9. Post-Golgi Trafficking in Plant Cells.Sub-cellular biochemistry · 2026
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  14. Characterization of the smallbioRxiv : the preprint server for biology · 2024
    Article
  15. Review
  16. Detection of Stress-Induced Changes in Subcellular Protein Distribution.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  17. Article
  18. Review
  19. Article
  20. Article

162 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

T UedaMolecular Membrane Biology Laboratory, RIKEN, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan. tueda@postman.riken.go.jp
M Yamaguchi
H Uchimiya
A Nakano
RIKEN Advanced Science Institute · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ara6 of Arabidopsis thaliana is a novel member of the Rab/Ypt GTPase family with unique structural features. It resembles Rab5 GTPases best, but lacks a large part of the C-terminal hypervariable region and the cysteine motif, and instead harbors an extra stretch of amino acid residues containing myristoylation and palmitoylation sites at the N-terminus. Ara6 is tightly associated with membranes and is expressed constitutively. In contrast, the conventional Rab5 ortholog, Ara7, is highly expressed only in actively dividing cells. Examination of green fluorescent protein (GFP)-tagged proteins indicates that both Ara6 and Ara7 are distributed on a subpopulation of endosomes and suggests their roles in endosomal fusion. The endosomal localization of Ara6 requires N-terminal fatty acylation, nucleotide binding and the C-terminal amino acid sequence coordinately. Proteins similar to Ara6 are found only in higher plants and thus represent a novel class of Rab GTPases regulating endocytic function in a plant- specific manner.

Indexed as

Arabidopsis ProteinsGTP PhosphohydrolasesAmino Acid SequenceArabidopsisCloning, MolecularEndocytosisGenes, ReporterGreen Fluorescent ProteinsGuanosine TriphosphateHumansLuminescent ProteinsMembrane ProteinsMolecular Sequence DataOpen Reading FramesPlant ProteinsPromoter Regions, GeneticAra6 protein, ArabidopsisArabidopsis ProteinsGreen Fluorescent ProteinsGTP PhosphohydrolasesGuanosine TriphosphateLuminescent ProteinsMembrane ProteinsPlant Proteinsrab GTP-Binding ProteinsRecombinant Fusion Proteins

Identifiers

PMID11532937
PMCPMC125591
OpenAlexW2038405241

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.