Evidence map›Paper›PMID 11514439›Full record

ArticleGenetics2001

Meiotic recombination involving heterozygous large insertions in Saccharomyces cerevisiae: formation and repair of large, unpaired DNA loops.

H M Kearney, D T Kirkpatrick, J L Gerton, T D Petes

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 68 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Mismatch repair during homologous and homeologous recombination.Cold Spring Harbor perspectives in biology · 2015
    Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
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  14. Review
  15. Article
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  17. Review
  18. Article
  19. A tale of tails: insights into the coordination of 3' end processing during homologous recombination.BioEssays : news and reviews in molecular, cellular and developmental biology · 2009
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

H M KearneyDepartment of Biology, Curriculum in Genetics and Molecular Biology, University of North Carolina, Chapel Hill, North Carolina 27599-3280, USA.
D T Kirkpatrick
J L Gerton
T D Petes
University of North Carolina at Chapel Hill · US

Funding

RECOMBINATION IN YEASTR01GM024110 · NIGMS · UNIVERSITY OF NORTH CAROLINA CHAPEL HILL · PI PETES, THOMAS · 1985 to 2015
$6.1M
NRSA IN GENETICST32GM007092 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI SEKELSKY, JEFF J. · 1985 to 2019
$5.9M
NIGMS NIH HHS 5 T32 GM07092-27NIGMS NIH HHS GM24110
6 · The paper itself

Abstract

Meiotic recombination in Saccharomyces cerevisiae involves the formation of heteroduplexes, duplexes containing DNA strands derived from two different homologues. If the two strands of DNA differ by an insertion or deletion, the heteroduplex will contain an unpaired DNA loop. We found that unpaired loops as large as 5.6 kb can be accommodated within a heteroduplex. Repair of these loops involved the nucleotide excision repair (NER) enzymes Rad1p and Rad10p and the mismatch repair (MMR) proteins Msh2p and Msh3p, but not several other NER (Rad2p and Rad14p) and MMR (Msh4p, Msh6p, Mlh1p, Pms1p, Mlh2p, Mlh3p) proteins. Heteroduplexes were also formed with DNA strands derived from alleles containing two different large insertions, creating a large "bubble"; repair of this substrate was dependent on Rad1p. Although meiotic recombination events in yeast are initiated by double-strand DNA breaks (DSBs), we showed that DSBs occurring within heterozygous insertions do not stimulate interhomologue recombination.

Indexed as

HeterozygoteMeiosisNucleic Acid ConformationRecombination, GeneticSaccharomyces cerevisiae ProteinsBase Pair MismatchBlotting, SouthernDNADNA-Binding ProteinsDNA RepairDNA Repair EnzymesEndonucleasesFungal ProteinsModels, GeneticMutS Homolog 2 ProteinMutS Homolog 3 ProteinDNADNA-Binding ProteinsDNA Repair EnzymesEndonucleasesFungal ProteinsMSH2 protein, S cerevisiaeMSH3 protein, S cerevisiaeMutS Homolog 2 ProteinMutS Homolog 3 ProteinNucleic Acid HeteroduplexesRAD10 protein, S cerevisiaeRAD1 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsSingle-Strand Specific DNA and RNA Endonucleases

Identifiers

PMID11514439
PMCPMC1461752
OpenAlexW2105447915

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.