Evidence map›Paper›PMID 11511544›Full record

ArticleGenes & development2001

The loop domain of heat shock transcription factor 1 dictates DNA-binding specificity and responses to heat stress.

S G Ahn, P C Liu, K Klyachko, R I Morimoto, D J Thiele

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 80 citations in OpenAlex.

  1. Article
  2. Article
  3. Heat Shock Proteins and HSF1 in Cancer.Frontiers in oncology · 2022
    Review
  4. Article
  5. Article
  6. Review
  7. Article
  8. FOXO3 on the Road to Longevity: Lessons From SNPs and Chromatin Hubs.Computational and structural biotechnology journal · 2019
    Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
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  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

S G AhnDepartment of Biological Chemistry, The University of Michigan Medical School, Ann Arbor, Michigan 48109-0606, USA.
P C Liu
K Klyachko
R I Morimoto
D J Thiele
University of Michigan–Ann Arbor · USNorthwestern University · US

Funding

REGULATION AND EXPRESSION OF THE HSP70 GENE FAMILYR37GM038109 · NIGMS · NORTHWESTERN UNIVERSITY · PI MORIMOTO, RICHARD I · 2000 to 2009
$5.6M
REGULATION AND EXPRESSION OF THE HUMAN HSP70 GENE FAMILYR01GM038109 · NIGMS · NORTHWESTERN UNIVERSITY · PI MORIMOTO, RICHARD I · 1987 to 2013
$2.2M
HEAT SHOCK TRANSCRIPTION FACTOR FUNCTION AND REGULATIONR01GM059911 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI THIELE, DENNIS J. · 1999 to 2007
$2.2M
FUNCTIONAL STUDIES OF A HUMAN HEAT SHOCK FACTOR IN YEASTF32GM018858 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI LIU, PHILLIP C · 1997 to 1999
–
MOLECULAR TOXICOLOGY TRAINING PROGRAMT32ES007284 · NIEHS · NORTHWESTERN UNIVERSITY · PI REDDY, JANARDAN K. · 1995 to 1999
–
NIEHS NIH HHS ES07284NIEHS NIH HHS T32 ES007284NIGMS NIH HHS F32 GM018858NIGMS NIH HHS GM18858NIGMS NIH HHS GM38109NIGMS NIH HHS GM59911NIGMS NIH HHS R01 GM038109NIGMS NIH HHS R01 GM059911NIGMS NIH HHS R37 GM038109
6 · The paper itself

Abstract

Eukaryotic heat shock transcription factors (HSF) regulate an evolutionarily conserved stress-response pathway essential for survival against a variety of environmental and developmental stresses. Although the highly similar HSF family members have distinct roles in responding to stress and activating target gene expression, the mechanisms that govern these roles are unknown. Here we identify a loop within the HSF1 DNA-binding domain that dictates HSF isoform specific DNA binding in vitro and preferential target gene activation by HSF family members in both a yeast transcription assay and in mammalian cells. These characteristics of the HSF1 loop region are transposable to HSF2 and sufficient to confer DNA-binding specificity, heat shock inducible HSP gene expression and protection from heat-induced apoptosis in vivo. In addition, the loop suppresses formation of the HSF1 trimer under basal conditions and is required for heat-inducible trimerization in a purified system in vitro, suggesting that this domain is a critical part of the HSF1 heat-stress-sensing mechanism. We propose that this domain defines a signature for HSF1 that constitutes an important determinant for how cells utilize a family of transcription factors to respond to distinct stresses.

Indexed as

Amino Acid SequenceAnimalsApoptosisDNADNA-Binding ProteinsHeat Shock Transcription FactorsHeat Stress DisordersHSP70 Heat-Shock ProteinsMiceMolecular Sequence DataProtein Structure, SecondaryProtein Structure, TertiarySaccharomyces cerevisiaeSequence Homology, Amino AcidTemperatureTranscription FactorsDNADNA-Binding ProteinsHeat Shock Transcription FactorsHSP70 Heat-Shock ProteinsTranscription Factors

Identifiers

PMID11511544
PMCPMC312766
OpenAlexW2098088378

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.