Evidence map›Paper›PMID 11511542›Full record

ArticleGenes & development2001

Active repression of RAR signaling is required for head formation.

T Koide, M Downes, R A Chandraratna, B Blumberg, K Umesono

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 126 citations in OpenAlex.

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  14. Article
  15. Input overload: Contributions of retinoic acid signaling feedback mechanisms to heart development and teratogenesis.Developmental dynamics : an official publication of the American Association of Anatomists · 2015
    Review
  16. Article
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  18. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

T KoideGraduate School of Biostudies, Kyoto University, Sakyoku, Kyoto 606-8507, Japan.
M Downes
R A Chandraratna
B Blumberg
K Umesono
Salk Institute for Biological Studies · USUniversity of California, Irvine · USKyoto University · JP

Funding

BXR SIGNALING IN VERTEBRATE DEVELOPMENTR01GM060572 · NIGMS · UNIVERSITY OF CALIFORNIA IRVINE · PI BLUMBERG, BRUCE · 2000 to 2004
$1.2M
NIGMS NIH HHS GM-60572NIGMS NIH HHS R01 GM060572
6 · The paper itself

Abstract

The retinoic acid receptors (RARs) recruit coactivator and corepressor proteins to activate or repress the transcription of target genes depending on the presence of retinoic acid (RA). Despite a detailed molecular understanding of how corepressor complexes function, there is no in vivo evidence to support a necessary function for RAR-mediated repression. Signaling through RARs is required for patterning along the anteroposterior (A-P) axis, particularly in the hindbrain and posterior, although the absence of RA is required for correct anterior patterning. Because RARs and corepressors are present in regions in which RA is absent, we hypothesized that repression mediated through unliganded RARs might be important for anterior patterning. To test this hypothesis, specific reagents were used that either reduce or augment RAR-mediated repression. Derepression of RAR signaling by expressing a dominant-negative corepressor resulted in embryos that exhibited phenotypes similar to those treated by RA. Anterior structures such as forebrain and cement gland were greatly reduced, as was the expression of molecular markers. Enhancement of target gene repression using an RAR inverse agonist resulted in up-regulation of anterior neural markers and expansion of anterior structures. Morpholino antisense oligonucleotide-mediated RARalpha loss-of-function phenocopied the effects of RA treatment and dominant-negative corepressor expression. Microinjection of wild-type or dominant-negative RARalpha rescued the morpholino phenotype, confirming that RAR is functioning anteriorly as a transcriptional repressor. Lastly, increasing RAR-mediated repression potentiated head-inducing activity of the growth factor inhibitor cerberus, whereas releasing RAR-mediated repression blocked cerberus from inducing ectopic heads. We conclude that RAR-mediated repression of target genes is critical for head formation. This requirement establishes an important biological role for active repression of target genes by nuclear hormone receptors and illustrates a novel function for RARs during vertebrate development.

Indexed as

AnimalsDNA-Binding ProteinsGene SilencingHeadIntercellular Signaling Peptides and ProteinsNuclear Receptor Co-Repressor 2ProteinsReceptors, Retinoic AcidRepressor ProteinsSignal TransductionXenopusXenopus Proteinscer1 protein, XenopusDNA-Binding ProteinsIntercellular Signaling Peptides and ProteinsNuclear Receptor Co-Repressor 2ProteinsReceptors, Retinoic AcidRepressor ProteinsXenopus Proteins

Identifiers

PMID11511542
PMCPMC312762
OpenAlexW2158334888

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.