Evidence map›Paper›PMID 11503961›Full record

ArticleInternational journal of hematology2001

Targeted integration of foreign DNA into a defined locus on chromosome 19 in K562 cells using AAV-derived components.

Katsuhiro Kogure, Masashi Urabe, Hiroaki Mizukami, Akihiro Kume, Yuko Sato, John Monahan, Keiya Ozawa

Abstract read
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In one paragraph

Article in International journal of hematology, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Ribosomal DNA integrating rAAV-rDNA vectors allow for stable transgene expression.Molecular therapy : the journal of the American Society of Gene Therapy · 2012
    Article
  3. Article
  4. Article
  5. Review
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Katsuhiro KogureDivision of Genetic Therapeutics, Center for Molecular Medicine, Jichi Medical School, Tochigi.
Masashi UrabeDivision of Genetic Therapeutics, Center for Molecular Medicine, Jichi Medical School, Tochigi.
Hiroaki MizukamiDivision of Genetic Therapeutics, Center for Molecular Medicine, Jichi Medical School, Tochigi.
Akihiro KumeDivision of Genetic Therapeutics, Center for Molecular Medicine, Jichi Medical School, Tochigi.
Yuko SatoDepartment of Intractable Diseases, Research Institute, International Medical Center of Japan, Tokyo, Japan.
John MonahanAvigen, Inc., Alameda, California, USA.
Keiya OzawaDivision of Genetic Therapeutics, Center for Molecular Medicine, Jichi Medical School, Tochigi. kozawa@ms.jichi.ac.jp.
Jichi Medical University · JPJapan Science and Technology Agency · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Targeted integration of foreign DNA is ideal for gene therapy, particularly when target cells such as hematopoietic cells actively divide and proliferate. Adeno-associated virus (AAV) has been shown to integrate its genome into a defined locus, AAVS1 (19q13.3-qter). The inverted terminal repeat (ITR) and Rep proteins are responsible for this site-specific integration, and a system has been developed that delivers a gene preferentially into AAVS1 by using these components of AAV. We examined whether this system could be applied to gene transfer into K562 cells. Two rep expression plasmids were tested, 1 driven by the cytomegalovirus (CMV) promoter (pCMVR78) and the other under the translational control of an internal ribosome entry site (pMGiR78) with mouse mammary tumor virus promoter. K562 cells were cotransfected with a rep plasmid and a plasmid containing a neo gene flanked by the ITRs. G418-resistant clones were isolated and analyzed by Southern blot analysis and fluorescence in situ hybridization (FISH). Southern blot analysis suggested AAVS1-specific integration of the neo gene in 6 (35%) of 17 clones when K562 cells were transfected with pMGiR78 by lipofection. FISH located the neo gene on chromosome 19 in 5 of these 6 clones (29%). Eight (32%) of 25 clones obtained by electroporation with pCMVR78 had the neo gene at AAVS1, according to Southern blot analysis, and 4 of these 8 clones (16%) were positive according to FISH analysis. These results suggest that site-specific integration of foreign DNA can be achieved at a significantly high rate in human hematopoietic cells using the AAV components.

Indexed as

Chromosomes, Human, Pair 19DependovirusDNA, ViralGenetic VectorsHematopoietic Stem CellsHumansK562 CellsTransfectionVirus IntegrationDNA, Viral

Identifiers

PMID11503961
OpenAlexW2086367339

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.