Evidence map›Paper›PMID 11500379›Full record

ArticleThe EMBO journal2001

Sir2p exists in two nucleosome-binding complexes with distinct deacetylase activities.

S Ghidelli, D Donze, N Dhillon, R T Kamakaka

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
9.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 94 citations in OpenAlex.

  1. Review
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  6. Measuring the buffering capacity of gene silencing inProceedings of the National Academy of Sciences of the United States of America · 2021
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  7. Nucleotide Metabolism Behind Epigenetics.Frontiers in endocrinology · 2021
    Review
  8. Article
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  10. Review
  11. A budding yeast's perspective on aging: the shape I'm in.Experimental biology and medicine (Maywood, N.J.) · 2015
    Review
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

S GhidelliUnit on Chromatin and Transcription, NICHD/NIH, Building 18T, Room 106, 18 Library Drive, Bethesda, MD 20892, USA.
D Donze
N Dhillon
R T Kamakaka
Eunice Kennedy Shriver National Institute of Child Health and Human Development · US

Funding

Studies On SilencingZ01HD008731 · NICHD · CHILD HEALTH AND HUMAN DEVELOPMENT · PI KAMAKAKA, ROHINTON T. · 2001 to 2005
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6 · The paper itself

Abstract

The absolute requirement for the histone deacetylase activity of Sir2p in silencing coupled with the conservation of Sir2p-like proteins in larger eukaryotes suggests that this molecule plays an important role in gene regulation in all organisms. Here we report the purification and characterization of two Sir2p-containing protein complexes; one of which contains Sir4p and the other Net1p. The Sir4p-containing complex has an NAD-dependent histone deacetylase activity, while the Net1p-containing complex possesses deacetylase activity but only weak NAD-dependent histone deacetylase activity. Finally, we demonstrate that the Sir2p-containing complexes bind nucleosomes efficiently and partially restrict accessibility of the linker DNA to enzymatic probes.

Indexed as

Cell Cycle ProteinsSaccharomyces cerevisiae ProteinsSilent Information Regulator Proteins, Saccharomyces cerevisiaeBinding SitesFungal ProteinsHistone DeacetylasesMutagenesisNuclear ProteinsNucleosomesRecombinant Fusion ProteinsSirtuin 2SirtuinsTrans-ActivatorsCell Cycle ProteinsFungal ProteinsHistone DeacetylasesNet1 protein, S cerevisiaeNuclear ProteinsNucleosomesRecombinant Fusion ProteinsSaccharomyces cerevisiae ProteinsSilent Information Regulator Proteins, Saccharomyces cerevisiaeSIR2 protein, S cerevisiaeSIR3 protein, S cerevisiaeSIR4 protein, S cerevisiaeSirtuin 2SirtuinsTrans-Activators

Identifiers

PMID11500379
PMCPMC125569
OpenAlexW1990778506

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.