Evidence map›Paper›PMID 11489948›Full record

ArticleThe Journal of experimental medicine2001

Point mutation in essential genes with loss or mutation of the second allele: relevance to the retention of tumor-specific antigens.

G B Beck-Engeser, P A Monach, D Mumberg, F Yang, S Wanderling, K Schreiber, R Espinosa, M M Le Beau, S C Meredith, H Schreiber

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of experimental medicine, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 47 citations in OpenAlex.

  1. CD4Science immunology · 2024
    Article
  2. One CD4+TCR and One CD8+TCR Targeting Autochthonous Neoantigens Are Essential and Sufficient for Tumor Eradication.Clinical cancer research : an official journal of the American Association for Cancer Research · 2024
    Article
  3. The Transcriptional Landscape ofInternational journal of molecular sciences · 2022
    Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. Review
  9. Article
  10. Eradication of Large Solid Tumors by Gene Therapy with a T-Cell Receptor Targeting a Single Cancer-Specific Point Mutation.Clinical cancer research : an official journal of the American Association for Cancer Research · 2016
    Article
  11. Review
  12. Article
  13. Article
  14. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

G B Beck-EngeserDepartment of Pathology, The University of Chicago, 5841 South Maryland Ave., Chicago, IL 60637, USA.
P A Monach
D Mumberg
F Yang
S Wanderling
K Schreiber
R Espinosa
M M Le Beau
S C Meredith
H Schreiber
University of Chicago · US

Funding

VIRAL ONCOLOGY CORE FACILITYP30CA014599 · NCI · UNIVERSITY OF CHICAGO · PI russell z szmulewitz · 1985 to 2026
$122.1M
MEDICAL SCIENTIST TRAININGT32GM007281 · NIGMS · UNIVERSITY OF CHICAGO · PI CLARK, MARCUS RAMSAY · 1985 to 2022
$32.1M
PATHOBIOLOGY OF MYELOMA AND ANTI-IDIOTYPIC IMMUNITYR01CA022677 · NCI · UNIVERSITY OF CHICAGO · PI SCHREIBER, HANS · 1985 to 2024
$6.3M
IMMUNOLOGY OF UNIQUE TUMOR-SPECIFIC ANTIGENSR01CA037156 · NCI · UNIVERSITY OF CHICAGO · PI SCHREIBER, HANS · 1985 to 2017
$3.1M
"UNIQUE" TUMOR ANTIGENS RECOGNIZED BY CD8+ T CELLSP01CA074182 · NCI · UNIVERSITY OF CHICAGO · PI MEREDITH, STEPHEN C. · 1998 to 2001
$1.3M
NCI NIH HHS CA 14599NCI NIH HHS P01-CA-74182NCI NIH HHS P30 CA014599NCI NIH HHS R01 CA022677NCI NIH HHS R01 CA037156NCI NIH HHS R01-CA-22677NCI NIH HHS R01-CA-37156NIGMS NIH HHS GM-07281NIGMS NIH HHS T32 GM007281
6 · The paper itself

Abstract

Antigens that are tumor specific yet retained by tumor cells despite tumor progression offer stable and specific targets for immunologic and possibly other therapeutic interventions. Therefore, we have studied two CD4(+) T cell-recognized tumor-specific antigens that were retained during evolution of two ultraviolet-light-induced murine cancers to more aggressive growth. The antigens are ribosomal proteins altered by somatic tumor-specific point mutations, and the progressor (PRO) variants lack the corresponding normal alleles. In the first tumor, 6132A-PRO, the antigen is encoded by a point-mutated L9 ribosomal protein gene. The tumor lacks the normal L9 allele because of an interstitial deletion from chromosome 5. In the second tumor, 6139B-PRO, both alleles of the L26 gene have point mutations, and each encodes a different tumor-specific CD4(+) T cell-recognized antigen. Thus, for both L9 and L26 genes, we observe "two hit" kinetics commonly observed in genes suppressing tumor growth. Indeed, reintroduction of the lost wild-type L9 allele into the 6132A-PRO variant suppressed the growth of the tumor cells in vivo. Since both L9 and L26 encode proteins essential for ribosomal biogenesis, complete loss of the tumor-specific target antigens in the absence of a normal allele would abrogate tumor growth.

Indexed as

Point MutationAllelesAmino Acid SequenceAnimalsAntigens, NeoplasmBase SequenceCD4-Positive T-LymphocytesDNA, NeoplasmDNA PrimersIn Situ Hybridization, FluorescenceMiceMolecular Sequence DataNeoplasms, Radiation-InducedRibosomal ProteinsRNA, MessengerRNA, NeoplasmAntigens, NeoplasmDNA, NeoplasmDNA Primersribosomal protein L9Ribosomal ProteinsRNA, MessengerRNA, NeoplasmRpl26 protein, mouse

Identifiers

PMID11489948
PMCPMC2193475
OpenAlexW2104130218

What OpenQuestion holds

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LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.