Evidence map›Paper›PMID 11489916›Full record

ArticleThe Journal of cell biology2001

A protein interaction map for cell polarity development.

B L Drees, B Sundin, E Brazeau, J P Caviston, G C Chen, W Guo, K G Kozminski, M W Lau, J J Moskow, A Tong and 12 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of cell biology, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 136 papers.

0numbers the graph read from it
0cells of the map it votes in
136citing papers in PubMed
12.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

136 citing papers in PubMed, 326 citations in OpenAlex.

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  9. Identification and functional characterization ofFrontiers in microbiology · 2022
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76 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 10 institutions in 2 countries.

B L DreesDepartment of Molecular and Cell Biology, University of California, Berkeley, CA 94720, USA.
B Sundin
E Brazeau
J P Caviston
G C Chen
W Guo
K G Kozminski
M W Lau
J J Moskow
A Tong
L R Schenkman
A McKenzie
P Brennwald
M Longtine
E Bi
C Chan
P Novick
C Boone
J R Pringle
T N Davis
S Fields
D G Drubin
University of Washington · USUniversity of California, Berkeley · USUniversity of North Carolina at Chapel Hill · USUniversity of Pennsylvania · USThe University of Texas at Austin · USUniversity of Toronto · CACornell University · USDuke Medical Center · USOklahoma State University · USYale University · US

Funding

ZDS2P REGULATES SWE1P-DEPENDENT POLARIZED CELL GROWTH IN S CEREVISIAEP41RR011823 · NCRR · UNIVERSITY OF WASHINGTON · PI DAVIS, TRACY · 1996 to 2011
$24.7M
REGULATION OF EXOCYTOSIS BY A RHO GTPPASER01GM054712 · NIGMS · WEILL MEDICAL COLLEGE OF CORNELL UNIV · PI PATRICK J BRENNWALD · 1998 to 2026
$9.5M
GENETICS OF SECRETION IN YEASTR01GM035370 · NIGMS · YALE UNIVERSITY · PI PETER Jay NOVICK · 1985 to 2026
$7.0M
The budding yeast endocytic pathwayR01GM050399 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI DRUBIN, DAVID G · 1997 to 2015
$5.9M
MORPHOGENESIS AND CYTOKINESIS IN THE YEAST CELL CYCLER37GM031006 · NIGMS · UNIVERSITY OF NORTH CAROLINA CHAPEL HILL · PI PRINGLE, JOHN R · 2000 to 2010
$4.8M
Genetics of Secretion in YeastR37GM035370 · NIGMS · YALE UNIVERSITY · PI NOVICK, PETER JAY · 2001 to 2010
$3.9M
SIGNALING MECHANISMS IN CELL POLARITY IN YEASTR01GM059216 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI BI, ERFEI · 1999 to 2012
$3.8M
GENETIC STUDY OF THE YEAST CELL CYCLER01GM031006 · NIGMS · UNIVERSITY OF NORTH CAROLINA CHAPEL HILL · PI PRINGLE, JOHN R · 1986 to 1999
–
NCRR NIH HHS P41 RR011823NCRR NIH HHS P41 RR11823NIGMS NIH HHS R01 GM031006NIGMS NIH HHS R01 GM035370NIGMS NIH HHS R01 GM050399NIGMS NIH HHS R01 GM054712NIGMS NIH HHS R01 GM059216NIGMS NIH HHS R01 GM31006NIGMS NIH HHS R01 GM35370NIGMS NIH HHS R01 GM50399NIGMS NIH HHS R01 GM54712NIGMS NIH HHS R01 GM59216NIGMS NIH HHS R37 GM031006NIGMS NIH HHS R37 GM035370
6 · The paper itself

Abstract

Many genes required for cell polarity development in budding yeast have been identified and arranged into a functional hierarchy. Core elements of the hierarchy are widely conserved, underlying cell polarity development in diverse eukaryotes. To enumerate more fully the protein-protein interactions that mediate cell polarity development, and to uncover novel mechanisms that coordinate the numerous events involved, we carried out a large-scale two-hybrid experiment. 68 Gal4 DNA binding domain fusions of yeast proteins associated with the actin cytoskeleton, septins, the secretory apparatus, and Rho-type GTPases were used to screen an array of yeast transformants that express approximately 90% of the predicted Saccharomyces cerevisiae open reading frames as Gal4 activation domain fusions. 191 protein-protein interactions were detected, of which 128 had not been described previously. 44 interactions implicated 20 previously uncharacterized proteins in cell polarity development. Further insights into possible roles of 13 of these proteins were revealed by their multiple two-hybrid interactions and by subcellular localization. Included in the interaction network were associations of Cdc42 and Rho1 pathways with proteins involved in exocytosis, septin organization, actin assembly, microtubule organization, autophagy, cytokinesis, and cell wall synthesis. Other interactions suggested direct connections between Rho1- and Cdc42-regulated pathways; the secretory apparatus and regulators of polarity establishment; actin assembly and the morphogenesis checkpoint; and the exocytic and endocytic machinery. In total, a network of interactions that provide an integrated response of signaling proteins, the cytoskeleton, and organelles to the spatial cues that direct polarity development was revealed.

Indexed as

ActinsBacterial Proteinscdc42 GTP-Binding Protein, Saccharomyces cerevisiaeCell PolarityEndocytosisFungal ProteinsGenes, cdcLuminescent Proteinsrho GTP-Binding ProteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSecretory VesiclesTwo-Hybrid System TechniquesActinsBacterial Proteinscdc42 GTP-Binding Protein, Saccharomyces cerevisiaeFungal ProteinsLuminescent ProteinsRHO1 protein, S cerevisiaerho GTP-Binding ProteinsSaccharomyces cerevisiae Proteinsyellow fluorescent protein, Bacteria

Identifiers

PMID11489916
PMCPMC2196425
OpenAlexW2160042914

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.