Evidence map›Paper›PMID 11486033›Full record

ArticleMolecular and cellular biology2001

Identification of receptor and heparin binding sites in fibroblast growth factor 4 by structure-based mutagenesis.

P Bellosta, A Iwahori, A N Plotnikov, A V Eliseenkova, C Basilico, M Mohammadi

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 66 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. In-Silico Analysis of Deleterious SNPs ofLife (Basel, Switzerland) · 2022
    Article
  5. Article
  6. Structural Biology of the FGF7 Subfamily.Frontiers in genetics · 2019
    Review
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Selecting antagonistic antibodies that control differentiation through inducible expression in embryonic stem cells.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  13. Review
  14. Article
  15. The structural biology of the FGF19 subfamily.Advances in experimental medicine and biology · 2012
    Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

P BellostaDepartment of Microbiology, New York University School of Medicine, 550 First Ave., New York, NY 10016, USA.
A Iwahori
A N Plotnikov
A V Eliseenkova
C Basilico
M Mohammadi
New York University · US

Funding

MECHANISMS OF FGF RECEPTOR REGULATION AND SIGNALINGR01DE013686 · NIDCR · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI MOHAMMADI, MOOSA · 2000 to 2020
$12.3M
VIRAL AND CELLULAR GENE EXPRESSION AND GROWTH REGULATIONR35CA042568 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI BASILICO, CLAUDIO · 1986 to 1999
–
NCI NIH HHS CA42568NIDCR NIH HHS DE13686NIDCR NIH HHS R01 DE013686
6 · The paper itself

Abstract

Fibroblast growth factors (FGFs) comprise a large family of multifunctional, heparin-binding polypeptides that show diverse patterns of interaction with a family of receptors (FGFR1 to -4) that are subject to alternative splicing. FGFR binding specificity is an essential mechanism in the regulation of FGF signaling and is achieved through primary sequence differences among FGFs and FGFRs and through usage of two alternative exons, IIIc and IIIb, for the second half of immunoglobulin-like domain 3 (D3) in FGFRs. While FGF4 binds and activates the IIIc splice forms of FGFR1 to -3 at comparable levels, it shows little activity towards the IIIb splice forms of FGFR1 to -3 as well as towards FGFR4. To begin to explore the structural determinants for this differential affinity, we determined the crystal structure of FGF4 at a 1.8-A resolution. FGF4 adopts a beta-trefoil fold similar to other FGFs. To identify potential receptor and heparin binding sites in FGF4, a ternary FGF4-FGFR1-heparin model was constructed by superimposing the FGF4 structure onto FGF2 in the FGF2-FGFR1-heparin structure. Mutation of several key residues in FGF4, observed to interact with FGFR1 or with heparin in the model, produced ligands with reduced receptor binding and concomitant low mitogenic potential. Based on the modeling and mutational data, we propose that FGF4, like FGF2, but unlike FGF1, engages the betaC'-betaE loop in D3 and thus can differentiate between the IIIc and IIIb splice isoforms of FGFRs for binding. Moreover, we show that FGF4 needs to interact with both the 2-O- and 6-O-sulfates in heparin to exert its optimal biological activity.

Indexed as

3T3 CellsAmino Acid SequenceAnimalsBinding SitesCHO CellsCricetinaeFibroblast Growth Factor 4Fibroblast Growth FactorsHeparinHumansMiceModels, MolecularMolecular Sequence DataMutagenesisProtein Structure, SecondaryProto-Oncogene ProteinsFGF4 protein, humanFgf4 protein, mouseFGFR1 protein, humanFgfr1 protein, mouseFGFR2 protein, humanFgfr2 protein, mouseFibroblast Growth Factor 4Fibroblast Growth FactorsHeparinProto-Oncogene ProteinsReceptor, Fibroblast Growth Factor, Type 1Receptor, Fibroblast Growth Factor, Type 2Receptor Protein-Tyrosine KinasesReceptors, Fibroblast Growth Factor

Identifiers

PMID11486033
PMCPMC87313
OpenAlexW2106086622

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.