Evidence map›Paper›PMID 11486018›Full record

ArticleMolecular and cellular biology2001

Interaction of the Srb10 kinase with Sip4, a transcriptional activator of gluconeogenic genes in Saccharomyces cerevisiae.

O Vincent, S Kuchin, S P Hong, R Townley, V K Vyas, M Carlson

Open access · bronzeAbstract read
In one paragraph

Article in Molecular and cellular biology, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 85 citations in OpenAlex.

  1. Review
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  4. Cyclin-dependent kinases: Masters of the eukaryotic universe.Wiley interdisciplinary reviews. RNA · 2023
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  5. Genetically Engineered Mice Unveil In Vivo Roles of the Mediator Complex.International journal of molecular sciences · 2023
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  6. Article
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  10. Article
  11. Molecular andFrontiers in cell and developmental biology · 2018
    Review
  12. Carbon Catabolite Repression in Filamentous Fungi.International journal of molecular sciences · 2017
    Review
  13. Mediator Tail Module Is Required for Tac1-ActivatedAntimicrobial agents and chemotherapy · 2017
    Article
  14. Article
  15. The Mediator complex: a central integrator of transcription.Nature reviews. Molecular cell biology · 2015
    Review
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

O VincentDepartment of Genetics and Development, Columbia University, 701 W. 168th Street, HSC 922, New York, NY 10032, USA.
S Kuchin
S P Hong
R Townley
V K Vyas
M Carlson
Geophysical Laboratory · USColumbia University · US

Funding

UPR--MEDICAL SCIENCES CAMPUS, MBRS PROGRAMS06GM008224 · NIGMS · UNIVERSITY OF PUERTO RICO MED SCIENCES · PI SILVA, WALTER I · 1989 to 2008
$28.0M
REGULATION OF YEAST INVERTASE GENE EXPRESSIONR37GM034095 · NIGMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI CARLSON, MARIAN B · 1996 to 2005
$3.1M
REGULATION OF YEAST INVERTASE GENE EXPRESSIONR01GM034095 · NIGMS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI CARLSON, MARIAN B · 1985 to 2014
$2.9M
SNF/SWI COMPLEX AND TRANSCRIPTIONAL ACTIVATIONR01GM047259 · NIGMS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI CARLSON, MARIAN B · 1992 to 2004
$1.3M
NIGMS NIH HHS GM08224NIGMS NIH HHS GM34095NIGMS NIH HHS GM47259NIGMS NIH HHS R01 GM034095NIGMS NIH HHS R01 GM047259NIGMS NIH HHS R37 GM034095NIGMS NIH HHS S06 GM008224
6 · The paper itself

Abstract

Sip4 is a Zn(2)Cys(6) transcriptional activator that binds to the carbon source-responsive elements of gluconeogenic genes in Saccharomyces cerevisiae. The Snf1 protein kinase interacts with Sip4 and regulates its phosphorylation and activator function in response to glucose limitation; however, evidence suggested that another kinase also regulates Sip4. Here we examine the role of the Srb10 kinase, a component of the RNA polymerase II holoenzyme that has been primarily implicated in transcriptional repression but also positively regulates Gal4. We show that Srb10 is required for phosphorylation of Sip4 during growth in nonfermentable carbon sources and that the catalytic activity of Srb10 stimulates the ability of LexA-Sip4 to activate transcription of a reporter. Srb10 and Sip4 coimmunoprecipitate from cell extracts and interact in two-hybrid assays, suggesting that Srb10 regulates Sip4 directly. We also present evidence that the Srb10 and Snf1 kinases interact with different regions of Sip4. These findings support the view that the Srb10 kinase not only plays negative roles in transcriptional control but also has broad positive roles during growth in carbon sources other than glucose.

Indexed as

Saccharomyces cerevisiae ProteinsZinc FingersBacterial ProteinsBasic-Leucine Zipper Transcription FactorsCyclin-Dependent Kinase 8Cyclin-Dependent KinasesFungal ProteinsGlucoseLexA Repressor ProteinMutagenesisPhosphorylationPrecipitin TestsRecombinant Fusion ProteinsSaccharomyces cerevisiaeSerine EndopeptidasesTrans-ActivatorsBacterial ProteinsBasic-Leucine Zipper Transcription FactorsCAT8 protein, S cerevisiaeCyclin-Dependent Kinase 8Cyclin-Dependent KinasesFungal ProteinsGlucoseLexA Repressor ProteinRecombinant Fusion ProteinsSaccharomyces cerevisiae ProteinsSerine EndopeptidasesSIP4 protein, S cerevisiaeSSN3 protein, S cerevisiaeTrans-Activators

Identifiers

PMID11486018
PMCPMC87298
OpenAlexW2100445710

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.