Evidence map›Paper›PMID 11483528›Full record

ArticleThe EMBO journal2001

Hda, a novel DnaA-related protein, regulates the replication cycle in Escherichia coli.

J Kato, T Katayama

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 147 papers.

0numbers the graph read from it
0cells of the map it votes in
147citing papers in PubMed
4.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

147 citing papers in PubMed, 271 citations in OpenAlex.

  1. Article
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  4. Phage Mu enlists the β-sliding clamp for late gene transcription.Proceedings of the National Academy of Sciences of the United States of America · 2026
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  10. Dispensability of extrinsic DnaA regulators inProceedings of the National Academy of Sciences of the United States of America · 2024
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  12. Mapping theMicrobiology (Reading, England) · 2024
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  13. LPS-DephosphorylatingMicroorganisms · 2024
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  14. Review
  15. IHF and Fis asInternational journal of molecular sciences · 2023
    Review
  16. Regulatory elements coordinating initiation of chromosome replication to theProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  17. Article
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  19. Mutations identified in engineeredFrontiers in microbiology · 2023
    Article
  20. Article

87 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

J KatoDepartment of Biology, Tokyo Metropolitan University, Minamiohsawa, Hachioji, Tokyo 192-0397, Japan. jkato@comp.metro-u.ac.jp
T Katayama
Tokyo Metropolitan University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The bacterial DnaA protein binds to the chromosomal origin of replication to trigger a series of initiation reactions, which leads to the loading of DNA polymerase III. In Escherichia coli, once this polymerase initiates DNA synthesis, ATP bound to DnaA is efficiently hydrolyzed to yield the ADP-bound inactivated form. This negative regulation of DnaA, which occurs through interaction with the beta-subunit sliding clamp configuration of the polymerase, functions in the temporal blocking of re-initiation. Here we show that the novel DnaA-related protein, Hda, from E.coli is essential for this regulatory inactivation of DnaA in vitro and in vivo. Our results indicate that the hda gene is required to prevent over-initiation of chromosomal replication and for cell viability. Hda belongs to the chaperone-like ATPase family, AAA(+), as do DnaA and certain eukaryotic proteins essential for the initiation of DNA replication. We propose that the once-per-cell-cycle rule of replication depends on the timely interaction of AAA(+) proteins that comprise the apparatus regulating the activity of the initiator of replication.

Indexed as

DNA ReplicationEscherichia coli ProteinsAdenosine TriphosphatasesAmino Acid SequenceBacterial ProteinsCell DivisionDNA, BacterialDNA-Binding ProteinsEscherichia coliGenes, BacterialMolecular Sequence DataMutagenesisNucleotidesReplication OriginAdenosine TriphosphatasesBacterial ProteinsDnaA protein, BacteriaDNA, BacterialDNA-Binding ProteinsEscherichia coli ProteinsHda protein, E coliNucleotides

Identifiers

PMID11483528
PMCPMC149159
OpenAlexW2093862172

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.