Evidence map›Paper›PMID 11472409›Full record

ArticleClinical and experimental immunology2001

Assessment of male CVID patients for mutations in the Btk gene: how many have been misdiagnosed?

S A Weston, M L Prasad, C G Mullighan, H Chapel, E M Benson

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In one paragraph

Article in Clinical and experimental immunology, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.3field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 42 citations in OpenAlex.

  1. A NovelFrontiers in pediatrics · 2018
    Article
  2. Review
  3. B-cell activating factor receptor deficiency is associated with an adult-onset antibody deficiency syndrome in humans.Proceedings of the National Academy of Sciences of the United States of America · 2009
    Article
  4. Common variable immunodeficiency: etiological and treatment issues.International archives of allergy and immunology · 2009
    Review
  5. Article
  6. Review
  7. TACI, isotype switching, CVID and IgAD.Immunologic research · 2007
    Article
  8. Review
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

S A WestonDepartment of Immunopathology, ICPMR, Westmead Hospital, Westmead, Australia.
M L Prasad
C G Mullighan
H Chapel
E M Benson
Westmead Hospital · AUChurchill Hospital · GBJohn Radcliffe Hospital · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The presentation of hypogammaglobulinaemia in young males without a family history of immunodeficiency can pose a diagnostic problem. In the past, the presence of B-cells has suggested a diagnosis of common variable immunodeficiency (CVID), although genotypic analysis has now clarified that individuals with B cells may have mutations in their Btk gene. In order to address the issue of how many male individuals with a clinical diagnosis of CVID do in fact have mutations in the Btk gene, we analysed a group of 24 male patients. Single-strand conformation polymorphism (SSCP) analysis was used to screen the patient cohort for mutations in the Btk gene. Given the size of the Btk gene, the number of patients in the cohort and the amount of available DNA, multiplex PCR reactions were utilized to span the 19 exons and promoter region of the gene. Where abnormal migration patterns were observed with multiplex PCR reactions, in nine of the 24 patients, the individual Btk gene fragments were re-amplified and analysed again by SSCP. Following this analysis, four patients continued to demonstrate abnormal SSCP migration patterns. However, direct sequencing of the relevant Btk gene fragments for these four CVID patients revealed a mutation in only one patient. The mutation was the previously described polymorphism at position 2031 of Btk gene within exon 18. These results indicate that caution should be taken with the application of SSCP analysis to mutation detection. While it has a role to play in screening large patient cohorts, direct sequencing is a necessary adjunct to such analysis. Finally, the clinical diagnosis of CVID in this cohort successfully excluded males with Btk mutations.

Indexed as

MutationAdultAgammaglobulinaemia Tyrosine KinaseAgammaglobulinemiaAgedCohort StudiesCommon Variable ImmunodeficiencyDiagnosis, DifferentialHumansMaleMiddle AgedPolymerase Chain ReactionPolymorphism, Single-Stranded ConformationalProtein-Tyrosine KinasesAgammaglobulinaemia Tyrosine KinaseBTK protein, humanProtein-Tyrosine Kinases

Identifiers

PMID11472409
PMCPMC1906085
OpenAlexW2060655563

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.