ArticlePlant physiology2001
Sequence and analysis of the tomato JOINTLESS locus.
Article in Plant physiology, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
18 citing papers in PubMed, 36 citations in OpenAlex.
- Article
- Natural and induced loss of function mutations in SlMBP21 MADS-box gene led to jointless-2 phenotype in tomato.Scientific reports · 2017Article
- Analysis of the melon (Cucumis melo) small RNAome by high-throughput pyrosequencing.BMC genomics · 2011Article
- Microcollinearity in an ethylene receptor coding gene region of the Coffea canephora genome is extensively conserved with Vitis vinifera and other distant dicotyledonous sequenced genomes.BMC plant biology · 2009Article
- Identification of miniature inverted-repeat transposable elements (MITEs) and biogenesis of their siRNAs in the Solanaceae: new functional implications for MITEs.Genome research · 2009Article
- Deep sequencing of tomato short RNAs identifies microRNAs targeting genes involved in fruit ripening.Genome research · 2008Article
- Article
- Genome mapping and molecular breeding of tomato.International journal of plant genomics · 2007Article
- Genetic characterization of the polycotyledon locus in tomato.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2006Article
- Euchromatin and pericentromeric heterochromatin: comparative composition in the tomato genome.Genetics · 2006Article
- Characteristics of the tomato nuclear genome as determined by sequencing undermethylated EcoRI digested fragments.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2005Article
- Fine mapping of the nematode resistance gene Mi-3 in Solanum peruvianum and construction of a S. lycopersicum DNA contig spanning the locus.Molecular genetics and genomics : MGG · 2005Article
- Article
- Complex organization and evolution of the tomato pericentromeric region at the FER gene locus.Plant physiology · 2005Article
- Article
- Analysis of sequence, map position, and gene expression reveals conserved essential genes for iron uptake in Arabidopsis and tomato.Plant physiology · 2004Article
- Localization of jointless-2 gene in the centromeric region of tomato chromosome 12 based on high resolution genetic and physical mapping.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2004Article
- Sequence analysis of a 282-kilobase region surrounding the citrus Tristeza virus resistance gene (Ctv) locus in Poncirus trifoliata L. Raf.Plant physiology · 2003Article
Corrections and comments
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Authors and funding
4 authors at 2 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
A 119-kb bacterial artificial chromosome from the JOINTLESS locus on the tomato (Lycopersicon esculentum) chromosome 11 contained 15 putative genes. Repetitive sequences in this region include one copia-like LTR retrotransposon, 13 simple sequence repeats, three copies of a novel type III foldback transposon, and four putative short DNA repeats. Database searches showed that the foldback transposon and the short DNA repeats seemed to be associated preferably with genes. The predicted tomato genes were compared with the complete Arabidopsis genome. Eleven out of 15 tomato open reading frames were found to be colinear with segments on five Arabidopsis bacterial artificial chromosome/P1-derived artificial chromosome clones. The synteny patterns, however, did not reveal duplicated segments in Arabidopsis, where over half of the genome is duplicated. Our analysis indicated that the microsynteny between the tomato and Arabidopsis genomes was still conserved at a very small scale but was complicated by the large number of gene families in the Arabidopsis genome.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.