Evidence map›Paper›PMID 11450948›Full record

ArticleVirus genes2001

The downstream activation sequence of the strict late Herpes Simplex Virus Type 1 U(L)38 promoter interacts with hTAF(II)70, a component of TFIID.

M D Petroski, G B Devi-Rao, M K Rice, E K Wagner

Abstract read
PubMed Publisher
In one paragraph

Article in Virus genes, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.4field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 6 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

M D PetroskiDepartment of Molecular Biology and Biochemistry, University of California, Irvine 92697-3900, USA.
G B Devi-Rao
M K Rice
E K Wagner
University of California, Irvine · US

Funding

CONTROL OF VIRAL RNA SYNTHESIS IN HERPESVIRUS INFECTIONR01CA011861 · NCI · UNIVERSITY OF CALIFORNIA IRVINE · PI OSBORNE, TIMOTHY F · 1985 to 2005
$1.9M
CONTROL OF VIRAL RNA SYNTHESIS IN HERPESVIRUS INFECTIONR37CA011861 · NCI · UNIVERSITY OF CALIFORNIA IRVINE · PI WAGNER, EDWARD K · 1988 to 1995
–
NCI NIH HHS CA11861NIAID NIH HHS AI07319
6 · The paper itself

Abstract

A class of strict late Herpes Simplex Virus Type 1 (HSV-1) promoters contains a conserved sequence element (termed the downstream activation sequence, DAS) located downstream of the transcription start site. These DAS-containing promoters also require both a TATA box and an initiator element for maximal levels of transcription. In this communication, we demonstrate that the downstream promoter element (DPE) found on a class of Drosophila TATA-less promoters and known to bind the homologue of human TAF(II)70 (a component of TFIID), can functionally substitute for DAS in the context of the strict late UL38 promoter in spite of no obvious sequence similarity. Although Drosophila DPE-containing promoters do not require a TATA box, the element does not remove the requirement for a TATA box when functioning in the HSV promoter. Next, we demonstrate that hTAF(II)70, interacts in a sequence specific manner with DAS as predicted from the fact that DPE binds Drosophila TBP. These results suggest that multiple TFIID/promoter interactions are important in the activation of HSV-1 late gene expression upon viral DNA replication. We propose that such interactions could be favored upon viral DNA replication since TFIID concentrates to viral transcription foci that form during the later stages of infection.

Indexed as

Capsid ProteinsPromoter Regions, GeneticAmino Acid SequenceAnimalsBase SequenceCapsidCell LineDNA, ViralDrosophilaHerpesvirus 1, HumanHumansMicroscopy, ConfocalTATA-Binding Protein Associated FactorsTATA BoxTranscription FactorsTranscription Factors, TFIICapsid ProteinsDNA, ViralTAF6 protein, humanTATA-Binding Protein Associated FactorsTranscription FactorsTranscription Factors, TFIITranscription Factor TFIIDVP19 protein, Human herpesvirus 1

Identifiers

PMID11450948
OpenAlexW261165715

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.