Evidence map›Paper›PMID 11449055›Full record

ArticleThe Plant cell2001

Arabidopsis ALF5, a multidrug efflux transporter gene family member, confers resistance to toxins.

A C Diener, R A Gaxiola, G R Fink

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 91 papers.

0numbers the graph read from it
0cells of the map it votes in
91citing papers in PubMed
8.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

91 citing papers in PubMed, 195 citations in OpenAlex.

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  15. Frontiers in plant science · 2022
    Article
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31 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

A C DienerWhitehead Institute for Biomedical Research, Massachusetts Institute of Technology, Department of Biology, Cambridge, MA 02142-1479, USA.
R A Gaxiola
G R Fink
Whitehead Institute for Biomedical Research · USMassachusetts Institute of Technology · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Arabidopsis genome contains many gene families that are not found in the animal kingdom. One of these is the multidrug and toxic compound extrusion (MATE) family, which has homology with bacterial efflux transporters. Arabidopsis has at least 54 members of this family, which often are found in tandem repeats. Analysis of ALF5, one member of this Arabidopsis family, suggests that its function is required for protection of the roots from inhibitory compounds. Loss of ALF5 function results in the sensitivity of the root to a number of compounds, including a contaminant of commercial agar. Moreover, expression of the Arabidopsis ALF5 cDNA in yeast confers resistance to tetramethylammonium. These phenotypes are consistent with a role for ALF5 as an efflux transporter. Both transcriptional and translational fusions of ALF5 to the beta-glucuronidase reporter gene show that ALF5 is expressed strongly in the root epidermis, a tissue in direct contact with the external environment. The distinct requirement for ALF5 function is remarkable because of the large number of MATE gene family members in Arabidopsis, one of which is adjacent to ALF5 and 83% identical to ALF5 at the amino acid level.

Indexed as

Arabidopsis ProteinsAmino Acid SequenceArabidopsisBase SequenceCarrier ProteinsChromosome MappingCloning, MolecularDrug Resistance, MultipleGene ExpressionGenes, PlantMembrane ProteinsMolecular Sequence DataMultigene FamilyMutationPhenotypePlant ProteinsALF5 protein, ArabidopsisArabidopsis ProteinsCarrier ProteinsMembrane ProteinsPlant ProteinsPovidonePyrrolidinonesQuaternary Ammonium Compoundstetramethylammonium

Identifiers

PMID11449055
PMCPMC139545
OpenAlexW2135482362

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.