Evidence map›Paper›PMID 11447271›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2001

Histone deacetylase-dependent transcriptional repression by pRB in yeast occurs independently of interaction through the LXCXE binding cleft.

B K Kennedy, O W Liu, F A Dick, N Dyson, E Harlow, M Vidal

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 29 citations in OpenAlex.

  1. Targeting epigenetics for cancer therapy.Archives of pharmacal research · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

B K KennedyMassachusetts General Hospital Cancer Center, Building 149, 13th Street, Charlestown, MA 02129, USA. kennedy@helix.mgh.harvard.edu
O W Liu
F A Dick
N Dyson
E Harlow
M Vidal
Dana-Farber Cancer Institute · USMassachusetts General Hospital · USHarvard University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We have developed a yeast model system to address transcriptional repression by the retinoblastoma protein (pRB). When fused to the DNA-binding domain of Gal4p (DB-pRB), pRB can repress transcription of reporter genes containing Gal4p binding sites; the histone deacetylase activity encoded by yeast RPD3 is required for DB-pRB repression. Mutation of the LXCXE binding cleft in pRB, a region reported to be required for histone deacetylase recruitment, does not interfere with pRB-mediated repression. From these findings based on yeast experiments, we surmise that the small pocket region of pRB must contain an additional domain that confers histone deacetylase-dependent transcriptional repression. This hypothesis was verified by experiments examining pRB-dependent histone deacetylase association in mammalian cells. In addition to RPD3, repression by pRB in yeast requires MSI1, an ortholog of RbAp48, but not SIN3 or SAP30. By comparing the genetic requirements of DB-pRB repression in yeast to those of other DB-repressor fusions, we can suggest a mechanism by which pRB recruits histone deacetylase activity.

Indexed as

DNA-Binding ProteinsGene Expression RegulationSaccharomyces cerevisiae ProteinsBinding SitesChromatin Assembly Factor-1Fungal ProteinsHistone Deacetylase 1Histone DeacetylasesHydro-LyasesRepressor ProteinsRetinoblastoma ProteinSaccharomyces cerevisiaeTranscription FactorsTranscription, GeneticChromatin Assembly Factor-1DNA-Binding ProteinsFungal ProteinsHDAC1 protein, humanHistone Deacetylase 1Histone DeacetylasesHydro-Lyasesimidazoleglycerolphosphate dehydrataseMSI1 protein, S cerevisiaeRepressor ProteinsRetinoblastoma ProteinRPD3 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsSIN3 protein, S cerevisiaeTranscription Factors

Identifiers

PMID11447271
PMCPMC37502
OpenAlexW2156779588

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.