Evidence map›Paper›PMID 11447261›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2001

A two-hybrid system for transactivator bait proteins.

M Hirst, C Ho, L Sabourin, M Rudnicki, L Penn, I Sadowski

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 59 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. International journal of molecular sciences · 2019
    Review
  6. Review
  7. Mutations in the ArsA ATPase that restore interaction with the ArsD metallochaperone.Biometals : an international journal on the role of metal ions in biology, biochemistry, and medicine · 2014
    Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Yeast two-hybrid, a powerful tool for systems biology.International journal of molecular sciences · 2009
    Review
  17. Review
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

M HirstDepartment of Biochemistry and Molecular Biology; University of British Columbia Vancouver, BC, Canada V6T 1Z3.
C Ho
L Sabourin
M Rudnicki
L Penn
I Sadowski
University of Toronto · CAOttawa Hospital Research InstituteOttawa Hospital · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We describe a two-hybrid strategy for detection of interactions with transactivator proteins. This repressed transactivator (RTA) system employs the N-terminal repression domain of the yeast general repressor TUP1. TUP1-GAL80 fusion proteins, when coexpressed with GAL4, are shown to inhibit transcription of GAL4-dependent reporter genes. This effect requires the C-terminal 30 residues of GAL4, which are required for interaction with GAL80 in vitro. Furthermore, repression of GAL transcription by TUP1-GAL80 requires SRB10, demonstrating that the TUP1 repression domain, in the context of a two-hybrid interaction, functions by the same mechanism as endogenous TUP1. Using this strategy, we demonstrate interactions between the mammalian basic helix-loop-helix proteins MyoD and E12, and between c-Myc and Bin-1. We have also identified interacting clones from a TUP1-cDNA fusion expression library by using GAL4-VP16 as a bait fusion. These results demonstrate that RTA is generally applicable for identifying and characterizing interactions with transactivator proteins in vivo.

Indexed as

Drosophila ProteinsNuclear ProteinsSaccharomyces cerevisiae ProteinsAnimalsAutophagy-Related ProteinsBinding SitesCarrier ProteinsCo-Repressor ProteinsCyclin-Dependent Kinase 8Cyclin-Dependent KinasesDNA-Binding ProteinsFungal ProteinsGene Expression Regulation, FungalHelix-Loop-Helix MotifsHistone DeacetylasesHumansATG16 protein, S cerevisiaeAutophagy-Related ProteinsCarrier ProteinsCo-Repressor ProteinsCyclin-Dependent Kinase 8Cyclin-Dependent KinasesDNA-Binding ProteinsDrosophila ProteinsFungal ProteinsGAL4 protein, S cerevisiaeGAL80 protein, S cerevisiaeHistone DeacetylasesInsect ProteinsMyoD ProteinNuclear ProteinsProto-Oncogene Proteins c-mycRepressor ProteinsRNA-Binding ProteinsSaccharomyces cerevisiae ProteinsSAP18 protein, humanSap18 protein, mouseSSN3 protein, S cerevisiaeTCF7L1 protein, humanTcf7l1 protein, mouseTCF Transcription FactorsTrans-ActivatorsTranscription Factor 7-Like 1 ProteinTranscription FactorsTUP1 protein, S cerevisiae

Identifiers

PMID11447261
PMCPMC37503
OpenAlexW2079011835

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.