Evidence map›Paper›PMID 11446902›Full record

ArticleBMC microbiology2001

Alteration in expression of the rat mitochondrial ATPase 6 gene during Pneumocystis carinii infection.

M A Asnicar, O Henegariu, M M Shaw, M P Goheen, M S Bartlett, J W Smith, C H Lee

Open access · goldAbstract read
In one paragraph

Article in BMC microbiology, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact, top 86% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 4 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

M A AsnicarDepartment of Pathology and Laboratory Medicine, Indiana University School of Medicine, Indianapolis, IN 46202, USA. asnicar_mark@lilly.com
O Henegariu
M M Shaw
M P Goheen
M S Bartlett
J W Smith
C H Lee
Indiana University School of MedicineIndiana University – Purdue University Indianapolis · US

Funding

MOLECULAR TYPING OF PNEUMOCYSTIS CARINIIR01AI034304 · NIAID · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI LEE, CHAO-HUNG · 1995 to 1997
–
NIAID NIH HHS R01 AI 34304
6 · The paper itself

Abstract

backgroundPneumocystis carinii causes pneumonia in immunocompromised patients with a high morbidity and mortality rate, but the interaction between this organism and the host cell is not well understood. The purpose of this research was to study the response of host cells to P. carinii infection on a molecular level.

resultsThe technique of mRNA differential display was used to detect genes whose expression may be affected by P. carinii infection. The nucleotide sequence of one differentially displayed DNA fragment was found to be identical to that of the rat mitochondrial ATPase 6 gene, which is a subunit of the F0F1-ATP synthase complex. A four-fold increase in expression of this gene was verified by Northern blot analysis of total RNA extracted from P. carinii-infected rat lung versus that from mock-infected rat lung. Localization of the cells containing ATPase 6 mRNA was accomplished by in situ hybridization. In sections of non-infected rat lung, these cells were found lining the distal parts of the respiratory tree and in apical areas of the alveoli. Histological location of these cells suggested that they were Clara cells and type II pneumocytes. This hypothesis was confirmed by co-localizing the mRNAs for ATPase 6 and surfactant protein B (SP-B) to the same cells by two-color fluorescent in situ hybridization.

conclusionsThe ATPase 6 gene is over expressed during P. carinii infection, and type II pneumocytes and Clara cells are the cell types responsible for this over-expression.

Indexed as

Adenosine TriphosphatasesAnimalsGene Expression Regulation, EnzymologicMitochondriaPneumocystis InfectionsRatsAdenosine Triphosphatases

Identifiers

PMID11446902
PMCPMC34520
OpenAlexW2111367200

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.