Evidence map›Paper›PMID 11441502›Full record

ArticleThe Korean journal of parasitology2001

Expressed sequence tags (ESTs) analysis of Acanthamoeba healyi.

H H Kong, M Y Hwang, H K Kim, D I Chung

Open access · bronzeAbstract read
In one paragraph

Article in The Korean journal of parasitology, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact, top 87% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

H H KongDepartment of Parasitology, Kyungpook National University School of Medicine, Taeyu 700-422, Korea.
M Y Hwang
H K Kim
D I Chung
Kyungpook National University · KR

Funding

Integrating CAM: Nursing EmphasisR25AT001240 · NCCIH · UNIVERSITY OF WASHINGTON · PI HEITKEMPER, MARGARET MCLEAN · 2002 to 2006
$1.5M
NCCIH NIH HHS R25 AT001240
6 · The paper itself

Abstract

Randomly selected 435 clones from Acanthamoeba healyi cDNA library were sequenced and a total of 387 expressed sequence tags (ESTs) had been generated. Based on the results of BLAST search, 130 clones (34.4%) were identified as the genes encoding surface proteins, enzymes for DNA, energy production or other metabolism, kinases and phosphatases, protease, proteins for signal transduction, structural and cytoskeletal proteins, cell cycle related proteins, transcription factors, transcription and translational machineries, and transporter proteins. Most of the genes (88.5%) are newly identified in the genus Acanthamoeba. Although 15 clones matched the genes of Acanthamoeba located in the public databases, twelve clones were actin gene which was the most frequently expressed gene in this study. These ESTs of Acanthamoeba would give valuable information to study the organism as a model system for biological investigations such as cytoskeleton or cell movement, signal transduction, transcriptional and translational regulations. These results would also provide clues to elucidate factors for pathogenesis in human granulomatous amoebic encephalitis or keratitis by Acanthamoeba.

Indexed as

Expressed Sequence TagsSequence Analysis, DNAAcanthamoebaAmebiasisAnimalsDNA, ProtozoanGene LibraryHumansProtozoan ProteinsSignal TransductionDNA, ProtozoanProtozoan Proteins

Identifiers

PMID11441502
PMCPMC2721092
OpenAlexW2164250455

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.