Evidence map›Paper›PMID 11438705›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2001

An antisense approach to phenotype-based gene cloning in Tetrahymena.

N D Chilcoat, N C Elde, A P Turkewitz

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

N D ChilcoatDepartment of Molecular Genetics and Cell Biology, University of Chicago, Chicago, IL 60637, USA.
N C Elde
A P Turkewitz

Funding

ULTRASTRUCTURE AND CYTOMORPHOLOGY COREP30DK042086 · NIDDK · UNIVERSITY OF CHICAGO · PI LIU, CAMBRIAN YANGSHAO · 1990 to 2025
$29.8M
PREDOCTORAL TRAINING IN GENETICS AND REGULATIONT32GM007197 · NIGMS · UNIVERSITY OF CHICAGO · PI ROTHMAN-DENES, LUCIA B. B · 1985 to 2020
$17.0M
MECHANISMS OF REGULATED EXOCYTOSIS IN TETRAHYMENAR01GM050946 · NIGMS · UNIVERSITY OF CHICAGO · PI TURKEWITZ, AARON P · 1994 to 2001
$446k
NIDDK NIH HHS DK42086NIDDK NIH HHS P30 DK042086NIGMS NIH HHS GM07197NIGMS NIH HHS GM07197-26NIGMS NIH HHS R01 GM050946NIGMS NIH HHS T32 GM007197
6 · The paper itself

Abstract

We report a pioneering approach using Tetrahymena thermophila that permits rapid identification of genes based on their null or hypomorphic phenotypes. This technique involves cell transformation with a library of plasmids that encode 26S ribosomal subunits containing short insertions. The insertions correspond to antisense sequences for a large number of genes. The majority of cells each acquires a single antisense sequence, which silences a single genomic locus. Because the insertion site within the ribosomal sequence is known, the silenced gene is easily amplified. We demonstrate that this approach can be used to identify genes required for dense core granule exocytosis.

Indexed as

DNA, AntisenseDNA, ProtozoanGenes, ProtozoanAnimalsBase SequenceCloning, MolecularMolecular Sequence DataPhenotypeTetrahymena thermophilaDNA, AntisenseDNA, Protozoan

Identifiers

PMID11438705
PMCPMC37500

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.