Evidence map›Paper›PMID 11438672›Full record

ArticleMolecular and cellular biology2001

Conformational switch and role of phosphorylation in PAK activation.

G Buchwald, E Hostinova, M G Rudolph, A Kraemer, A Sickmann, H E Meyer, K Scheffzek, A Wittinghofer

Abstract read
In one paragraph

Article in Molecular and cellular biology, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 105 citations in OpenAlex.

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  9. Article
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  12. Article
  13. Article
  14. Review
  15. Targeting PAK1.Biochemical Society transactions · 2017
    Review
  16. Article
  17. Structural insights into the intertwined dimer of fyn SH2.Protein science : a publication of the Protein Society · 2015
    Article
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

G BuchwaldMax-Planck-Institut für Molekulare Physiologie, 44227 Dortmund, Germany.
E Hostinova
M G Rudolph
A Kraemer
A Sickmann
H E Meyer
K Scheffzek
A Wittinghofer
Max Planck Institute of Molecular Physiology · DERuhr University Bochum · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

p21-activated protein kinases (PAKs) are involved in signal transduction processes initiating a variety of biological responses. They become activated by interaction with Rho-type small GTP-binding proteins Rac and Cdc42 in the GTP-bound conformation, thereby relieving the inhibition of the regulatory domain (RD) on the catalytic domain (CD). Here we report on the mechanism of activation and show that proteolytic digestion of PAK produces a heterodimeric RD-CD complex consisting of a regulatory fragment (residues 57 to 200) and a catalytic fragment (residues 201 to 491), which is active in the absence of Cdc42. Cdc42-GppNHp binds with low affinity (K(d) 0.6 microM) to intact kinase, whereas the affinity to the isolated regulatory fragment is much higher (K(d) 18 nM), suggesting that the difference in binding energy is used for the conformational change leading to activation. The full-length kinase, the isolated RD, and surprisingly also their complexes with Cdc42 behave as dimers on a gel filtration column. Cdc42-GppNHp interaction with the RD-CD complex is also of low affinity and does not dissociate the RD from the CD. After autophosphorylation of the kinase domain, Cdc42 binds with high (14 nM) affinity and dissociates the RD-CD complex. Assuming that the RD-CD complex mimics the interaction in native PAK, this indicates that the small G protein may not simply release the RD from the CD. It acts in a more subtle allosteric control mechanism to induce autophosphorylation, which in turn induces the release of the RD and thus full activation.

Indexed as

AnimalsCatalysisCatalytic Domaincdc42 GTP-Binding ProteinChromatography, GelCircular DichroismDimerizationDose-Response Relationship, DrugEnzyme ActivationGlutathione TransferaseGTP-Binding ProteinsKineticsModels, Biologicalp21-Activated KinasesPhosphorylationProtein Bindingcdc42 GTP-Binding ProteinGlutathione TransferaseGTP-Binding Proteinsp21-Activated KinasesProtein Serine-Threonine Kinasesrac GTP-Binding ProteinsRecombinant Fusion Proteins

Identifiers

PMID11438672
PMCPMC87242
OpenAlexW2116908725

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.