Evidence map›Paper›PMID 11433036›Full record

ArticleNucleic acids research2001

DNA repair and sequence context affect (1)O(2)-induced mutagenesis in bacteria.

L F Agnez-Lima, R L Napolitano, R P Fuchs, P D Mascio, A R Muotri, C F Menck

Open access · bronzeAbstract read
In one paragraph

Article in Nucleic acids research, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 21 citations in OpenAlex.

  1. The role of Fpg protein in UVC-induced DNA lesions.Redox report : communications in free radical research · 2012
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

L F Agnez-LimaDepartamento de Biologia Celular e Genética-Centro de Biociências, Universidade Federal do Rio Grande do Norte, Natal, RN, Brazil.
R L Napolitano
R P Fuchs
P D Mascio
A R Muotri
C F Menck
Universidade Federal do Rio Grande do Norte · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Electronic excited molecular oxygen (singlet oxygen, (1)O(2)) is known to damage DNA, yielding mutations. In this work, the mutagenicity induced by (1)O(2) in a defined sequence of DNA was investigated after replication in Escherichia coli mutants deficient for nucleotide and base excision DNA repair pathways. For this purpose a plasmid containing a (1)O(2)-damaged 14 base oligonucleotide was introduced into E.coli by transfection and mutations were screened by hybridization with an oligonucleotide with the original sequence. Mutagenesis was observed in all strains tested, but it was especially high in the BH20 (fpg), AYM57 (fpg mutY) and AYM84 (fpg mutY uvrC) strains. The frequency of mutants in the fpg mutY strain was higher than in the triple mutant fpg mutY uvrC, suggesting that activity of the UvrABC excinuclease can favor the mutagenesis of these lesions. Additionally, most of the mutations were G-->T and G-->C transversions, but this was dependent on the position of the guanine in the sequence and on repair deficiency in the host bacteria. Thus, the kind of repair and the mutagenesis associated with (1)O(2)-induced DNA damage are linked to the context of the damaged sequence.

Indexed as

DNA GlycosylasesEndodeoxyribonucleasesEscherichia coli ProteinsBacterial ProteinsBase SequenceDNA DamageDNA-Formamidopyrimidine GlycosylaseDNA RepairDNA ReplicationEscherichia coliGenetic VectorsMutagenesisMutationN-Glycosyl HydrolasesOxygenPlasmidsBacterial ProteinsDNA-Formamidopyrimidine GlycosylaseDNA-formamidopyrimidine glycosylase, E coliDNA GlycosylasesEndodeoxyribonucleasesEscherichia coli ProteinsmutY adenine glycosylaseN-Glycosyl HydrolasesOxygenSinglet OxygenUvrC protein, E coli

Identifiers

PMID11433036
PMCPMC55764
OpenAlexW2133676824

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.