Evidence map›Paper›PMID 11433028›Full record

ArticleNucleic acids research2001

Developmentally-regulated packaging of mitochondrial DNA by the HMG-box protein mtTFA during Xenopus oogenesis.

E L Shen, D F Bogenhagen

Open access · bronzeAbstract read
In one paragraph

Article in Nucleic acids research, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Mitochondrial DNA transcription regulation and nucleoid organization.Journal of inherited metabolic disease · 2011
    Review
  7. Article
  8. Association of mitochondrial antioxidant enzymes with mitochondrial DNA as integral nucleoid constituents.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2009
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

E L ShenDepartment of Pharmacological Sciences, State University of New York at Stony Brook, Stony Brook, NY 11794-8651, USA.
D F Bogenhagen
State University of New York · US

Funding

Mitochondrial DNA Polymerase Structure and FunctionR01GM029681 · NIGMS · STATE UNIVERSITY NEW YORK STONY BROOK · PI BOGENHAGEN, DANIEL F. · 1985 to 2005
$1.5M
NIGMS NIH HHS GM29681NIGMS NIH HHS R01 GM029681
6 · The paper itself

Abstract

Mature Xenopus oocytes are highly enriched for mitochondria. The organelles are stored and partitioned to newly-arising cells during embryogenesis, when there is little mitochondrial DNA (mtDNA) replication or transcription. A previously described member of the high mobility group (HMG) family of proteins, mtTFA, has been suggested to play a role in control of mtDNA copy number. mtTFA serves as a mitochondrial transcription factor in humans and Xenopus and as an abundant mtDNA packaging protein in yeast, like its prokaryotic histone-like counterpart, HU protein. Northern blot analysis demonstrated that expression of the gene was regulated during Xenopus oogenesis and specifically peaked at stage II. Western and Southern blotting were used to quantify amounts of the protein and mtDNA, respectively, in each stage of oogenesis. mtTFA:mtDNA ratios were found to be relatively low in previtellogenic oocytes while the ratios increased markedly in mature oocytes.

Indexed as

DNA-Binding ProteinsMitochondrial ProteinsXenopus laevisAnimalsBlotting, SouthernBlotting, WesternDNA, MitochondrialFemaleHigh Mobility Group ProteinsNuclear ProteinsOocytesOogenesisRNA, MessengerTranscription FactorsDNA-Binding ProteinsDNA, MitochondrialHigh Mobility Group ProteinsMitochondrial Proteinsmitochondrial transcription factor ANuclear ProteinsRNA, MessengerTranscription Factors

Identifiers

PMID11433028
PMCPMC55765
OpenAlexW2132197657

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.