Evidence map›Paper›PMID 11421365›Full record

ArticleRNA (New York, N.Y.)2001

An unexpected, conserved element of the U3 snoRNA is required for Mpp10p association.

S Wormsley, D A Samarsky, M J Fournier, S J Baserga

Open access · bronzeAbstract read
In one paragraph

Article in RNA (New York, N.Y.), 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 24 citations in OpenAlex.

  1. Yeast pre-rRNA is processed at the A' site.microPublication biology · 2025
    Article
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  7. Cross-linking, ligation, and sequencing of hybrids reveals RNA-RNA interactions in yeast.Proceedings of the National Academy of Sciences of the United States of America · 2011
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

S WormsleyDepartment of Therapeutic Radiology, Yale University School of Medicine, New Haven, Connecticut 06520-8040, USA.
D A Samarsky
M J Fournier
S J Baserga
Yale University · USUniversity of Massachusetts Amherst · USUniversity of Massachusetts Chan Medical School · US

Funding

The Architecture and Function of RNPs Required for Ribosome BiogenesisR01GM052581 · NIGMS · YALE UNIVERSITY · PI BASERGA, SUSAN J · 2001 to 2013
$4.4M
ASSEMBLY, LOCALIZATION AND FUNCTION OF THE U3 SNRNPR29GM052581 · NIGMS · YALE UNIVERSITY · PI BASERGA, SUSAN J · 1996 to 2000
$120k
NIGMS NIH HHS GM52581NIGMS NIH HHS R01 GM052581
6 · The paper itself

Abstract

The U3 small nucleolar ribonucleoprotein (snoRNP) is composed of a small nucleolar RNA (snoRNA) and at least 10 proteins. The U3 snoRNA base pairs with the pre-rRNA to carry out the A0, A1, and A2 processing reactions that lead to the release of the 18S rRNA from the nascent pre-rRNA transcript. The yeast U3 snoRNA can be divided into a short 5' domain (nt 1-39) and a larger 3' domain (73 to the 3' end) separated by a stretch of nucleotides called the hinge region (nt 40-72). The sequences required for pre-rRNA base pairing are found in the 5' domain and hinge region whereas the 3' domain is largely covered with proteins. Mpp10p, one of the protein components unique to the U3 snoRNP, plays a role in processing at the A1 and A2 sites. Because of its critical role in U3 snoRNP function, we determined which sequences in the U3 snoRNA are required for Mpp10p association. Unlike fibrillarin and all the previous U3 snoRNP components studied in this manner, sequences in the 3' domain are not sufficient for Mpp10p association. Instead, a conserved sequence element in the U3 snoRNA hinge region is required, placing Mpp10p near the 5' domain that carries out the pre-rRNA base-pairing interactions in the functional center of the U3 snoRNP.

Indexed as

Base SequenceChromosomal Proteins, Non-HistoneDNA PrimersMolecular Sequence DataMutationNucleic Acid ConformationPhosphoproteinsPrecipitin TestsProtein BindingRibonucleoproteinsRNA, Small NucleolarSaccharomyces cerevisiae ProteinsChromosomal Proteins, Non-HistoneDNA PrimersfibrillarinMPP10 protein, S cerevisiaePhosphoproteinsRibonucleoproteinsRNA, Small NucleolarRNA, U3 small nucleolarSaccharomyces cerevisiae Proteins

Identifiers

PMID11421365
PMCPMC1370138
OpenAlexW2159195583

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.