Evidence map›Paper›PMID 11420733›Full record

ReviewOncogene2001

Methyl CpG binding proteins: coupling chromatin architecture to gene regulation.

P A Wade

Abstract readReview
PubMed Publisher
In one paragraph

Review in Oncogene, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 75 papers.

0numbers the graph read from it
0cells of the map it votes in
75citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

75 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Epigenetic Factors and ncRNAs in Testicular Cancer.International journal of molecular sciences · 2023
    Review
  5. Review
  6. Vascular mechanotransduction.Physiological reviews · 2023
    Review
  7. The landscape of CRISPR/Cas9 for inborn errors of metabolism.Molecular genetics and metabolism · 2023
    Review
  8. Article
  9. Review
  10. Article
  11. Article
  12. Review
  13. Epigenetic Factors of Disease.Diseases (Basel, Switzerland) · 2019
    Article
  14. Article
  15. Effects of arsenic toxicity beyond epigenetic modifications.Environmental geochemistry and health · 2018
    Review
  16. Dietary Modulation of the Epigenome.Physiological reviews · 2018
    Review
  17. Article
  18. Review
  19. Review
  20. Article

15 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author.

P A WadeEmory University School of Medicine, Department of Pathology and Laboratory Medicine, Woodruff Memorial Research Building-Room 7105B, 1639 Pierce Drive, Atlanta, GA 30322, USA.

Funding

HISTONE DEACETYLASES: REGULATORS OF TRANSCRIPTIONK22HD001238 · NICHD · EMORY UNIVERSITY · PI WADE, PAUL A · 2000 to 2001
$291k
NICHD NIH HHS 1K22 HD01238-01
6 · The paper itself

Abstract

A correlation between DNA methylation and transcriptional silencing has existed for many years. Recently, substantial progress has been reported in the search for proteins that interpret the regulatory information inherent in DNA methylation and translate this information into functional states, resulting in the identification of a family of highly conserved proteins, the MBD family. Direct connections between these proteins and histone modification enzymes have emerged as a common theme, implying that DNA methylation exerts its effects primarily through repressive chromatin architecture. Recent structural determinations of the DNA binding domain of two MBD family members, MeCP2 and MBD1, provide a framework to model the interactions of this family with DNA. Comparative sequence analysis and experimental DNA binding data can be interpreted using this structural framework allowing one to contrast the members of the MBD family with each other and to predict the properties of new family members. The identification of mutations in MeCP2, the founding member of this family, as causal for the neurological developmental disorder Rett Syndrome provides additional information regarding amino acid residues crucial to the functions of this interesting protein family.

Indexed as

Chromosomal Proteins, Non-HistoneDNA MethylationRepressor ProteinsAmino Acid SequenceChromatinDNA-Binding ProteinsGene Expression RegulationMethyl-CpG-Binding Protein 2Molecular Sequence DataProtein BindingSequence Homology, Amino AcidChromatinChromosomal Proteins, Non-HistoneDNA-Binding ProteinsMBD3 protein, humanMethyl-CpG-Binding Protein 2Repressor Proteins

Identifiers

PMID11420733

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.