Evidence map›Paper›PMID 11413327›Full record

ArticleJournal of virology2001

Nef from human immunodeficiency virus type 1(F12) inhibits viral production and infectivity.

O T Fackler, P d'Aloja, A S Baur, M Federico, B M Peterlin

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.8field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 33 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 3 countries.

O T FacklerDepartment of Medicine, Howard Hughes Medical Institute, University of California at San Francisco, San Francisco, CA 94143-0703, USA.
P d'Aloja
A S Baur
M Federico
B M Peterlin
Friedrich-Alexander-Universität Erlangen-Nürnberg · DEHoward Hughes Medical Institute · USIstituto Superiore di Sanità · IT

Funding

IN VITRO AND IN VIVO FUNCTION OF HIV AND SIV NEF GENESR01AI038532 · NIAID · UNIVERSITY OF CALIFORNIA DAVIS · PI LUCIW, PAUL A · 1995 to 2002
$1.8M
NIAID NIH HHS R01 AI38532-01
6 · The paper itself

Abstract

Human immunodeficiency virus type 1(F12) (HIV-1(F12)) interferes with the replication of other strains of HIV. Its accessory protein, Nef, is sufficient for this phenotype, where the production and infectivity of HIV are impaired significantly. The analysis of three rare mutations in this Nef protein revealed that these effects could be separated genetically. Moreover, the defect in virus production correlated with the lack of processing of the p55(Gag) precursor in the presence of Nef from HIV-1(F12). Importantly, the introduction of one of these mutations (E177G) into Nef from HIV-1(NL4-3) also created a dominant-negative Nef protein. Effects of Nef from HIV-1(F12) on virus production and Gag processing correlated with its altered subcellular distribution. Moreover, the association with two new cellular proteins with molecular masses of 74 and 75 kDa, which do not interact with other Nef proteins, correlated with the decreased virion infectivity. The identification of a dominant-negative protein for the production and infectivity of HIV suggests that Nef plays an active role at this stage of the viral replicative cycle.

Indexed as

CD8 AntigensCell LineDown-RegulationGene Products, gagGene Products, nefHIV-1HIV InfectionsHumansMutationnef Gene Products, Human Immunodeficiency VirusProtein BindingProtein PrecursorsProteinsTransfectionVirulenceVirus ReplicationCD8 AntigensGene Products, gagGene Products, nefnef Gene Products, Human Immunodeficiency Virusp55 gag precursor protein, Human immunodeficiency virus 1Protein PrecursorsProteins

Identifiers

PMID11413327
PMCPMC114383
OpenAlexW1986340702

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.