Evidence map›Paper›PMID 11410654›Full record

ArticleNucleic acids research2001

The RNA-binding specificity of the mouse Dazl protein.

J P Venables, M Ruggiu, H J Cooke

Open access · bronzeAbstract read
In one paragraph

Article in Nucleic acids research, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 83 citations in OpenAlex.

  1. Article
  2. Article
  3. Whole-Transcriptome Sequencing-Based Analysis ofInternational journal of molecular sciences · 2020
    Article
  4. Article
  5. Dazl determines primordial follicle formation through the translational regulation of Tex14.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2019
    Article
  6. Article
  7. Article
  8. Article
  9. Efficient generation of transgenic reporter strains and analysis of expression patterns in Caenorhabditis elegans using library MosSCI.Developmental dynamics : an official publication of the American Association of Anatomists · 2016
    Article
  10. Article
  11. A premeiotic function for boule in the planarian Schmidtea mediterranea.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  12. Is there a role for DAZL in human female fertility?Molecular human reproduction · 2016
    Article
  13. DAZ Family Proteins, Key Players for Germ Cell Development.International journal of biological sciences · 2015
    Review
  14. Article
  15. Article
  16. Article
  17. Kinked β-strands mediate high-affinity recognition of mRNA targets by the germ-cell regulator DAZL.Proceedings of the National Academy of Sciences of the United States of America · 2011
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

J P VenablesMedical Research Council Human Genetics Unit, Western General Hospital, Crewe Road, Edinburgh EH4 2XU, UK. j.venables@ncl.ac.uk
M Ruggiu
H J Cooke
Medical Research Council · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DAZ is an RNA-binding protein encoded by a region on the Y chromosome implicated in infertility, and DAZ-like (Dazl) proteins are master regulators of germ line gene expression in all animals. In mice Dazl is only expressed in germ cells and is necessary for meiosis. A dual approach was taken to understand the RNA-binding specificity of the Dazl protein: (i) traditional SELEX and (ii) a novel tri-hybrid screen. Both approaches led to the same conclusion, namely that Dazl binds oligo(U) stretches interspersed by G or C residues. In a directed tri-hybrid assay the strongest interaction was with the consensus (GUn)n. This motif is found in the 5' UTR of CDC25C whose homologue is thought to be the target of Boule, the Dazl homologue in flies. CDC25C 5' UTR also interacted specifically with Dazl in vitro. The tri-hybrid screen retrieved UTRs of known genes that may be physiological substrates of Dazl.

Indexed as

5' Untranslated RegionsAnimalsBinding Sitescdc25 PhosphatasesCell Cycle ProteinsConsensus SequenceGene Expression RegulationMicePoly UProtein BindingProteinsRecombinant Fusion ProteinsRegulatory Sequences, Nucleic AcidRNA-Binding ProteinsSubstrate SpecificityTwo-Hybrid System Techniques5' Untranslated RegionsCDC25C protein, humanCdc25c protein, mousecdc25 PhosphatasesCell Cycle ProteinsDAZL protein, humanPoly UProteinsRecombinant Fusion ProteinsRNA-Binding Proteins

Identifiers

PMID11410654
PMCPMC55744
OpenAlexW2071133831

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.