Evidence map›Paper›PMID 11409409›Full record

ArticleAnnals of human genetics2000

2E4/Kaptin (KPTN)--a candidate gene for the hearing loss locus, DFNA4.

E L Bearer, A F Chen, A H Chen, Z Li, H F Mark, R J Smith, C L Jackson

Open access · bronzeAbstract read
In one paragraph

Article in Annals of human genetics, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.4field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Cochlin in the eye: functional implications.Progress in retinal and eye research · 2007
    Review
  10. Article
  11. Refinement of the DFNA4 locus to a 1.44 Mb region in 19q13.33.Journal of molecular medicine (Berlin, Germany) · 2004
    Article
  12. Actin dynamics in platelets.International review of cytology · 2002
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

E L BearerDepartment of Pathology and Laboratory Medicine, Brown University, Providence, RI 02912, USA. Elaine_Bearer@Brown.edu
A F Chen
A H Chen
Z Li
H F Mark
R J Smith
C L Jackson
Lifespan · USUniversity of Iowa · USBrown University · US

Funding

AUTOSOMAL DOMINANT NONSYNDROMIC HEARING LOSSR01DC003544 · NIDCD · UNIVERSITY OF IOWA · PI SMITH, RICHARD J.H. · 1998 to 2017
$7.8M
MOLECULAR MECHANISMS OF ACTIN DYNAMICS IN PLATELETSR01GM047368 · NIGMS · BROWN UNIVERSITY · PI BEARER, ELAINE L · 1994 to 2003
$1.2M
NIDCD NIH HHS DC-03544NIDCD NIH HHS R01 DC003544NIGMS NIH HHS GM47368NIGMS NIH HHS R01 GM047368
6 · The paper itself

Abstract

Stereocilia of the inner ear play an integral role in the mechanotransduction of sound. Their structural support is derived from actin filaments and actin-binding proteins. We have identified a novel actin-binding protein, 2E4-kaptin (KPTN), which appears to be involved in this structural network. Using double label immunofluorescence, we now show that KPTN extends beyond the barbed ends of actin filaments at the tips of stereocilia, and using cloned human cDNA, we mapped KPTN to chromosome 19q13.4. A combination of FISH, radiation hybrid mapping and YAC screening localized KPTN between markers D19S412 and NIB1805, making this gene an excellent functional and positional candidate for DFNA4, a form of autosomal dominant non-syndromic hearing loss. We identified a second family with inherited deafness that also maps to the DFNA4 region. To screen KPTN for deafness-causing mutations, we first determined its genomic structure and then completed a mutational analysis by direct sequencing and SSCP in affected family members. Although no deafness-causing mutations were identified in the coding region, KPTN remains an excellent candidate gene for hearing loss; by synteny, its murine orthologue also remains a candidate gene for the Nijmegan waltzer (nv) mouse mutant, which has vestibular defects and a variable sensorineural hearing loss.

Indexed as

AdultAnimalsChickensChromosome MappingChromosomes, Human, Pair 19DeafnessFemaleHumansIn Situ Hybridization, FluorescenceMaleMiceMicrofilament ProteinsMicroscopy, FluorescenceMolecular Sequence DataPedigreePolymerase Chain ReactionKPTN protein, humanMicrofilament Proteins

Identifiers

PMID11409409
PMCPMC3376086
OpenAlexW2169281350

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.